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Information for unigene UN18687
FASTA Sequence |
Unigene ID: UN18687 | Length: 694 |
| SNP | CTTTTCACTCGTTCGACGAGAAAAAACAAAGTTGAAGGAAAAAAAAATCTAAAAGGGATCGATTTGCCACGCCATGTCTGGAGAAG
AAGAAGAGAACGCCGCCGAGCTTAAGATCGGAGACGAGTTTTTGAAGGCGAAGTGCTTAATGAACTGTGAGGTCTCTTTGATCCTT
GAGCACAAGTATGAACAGCTTCAGCAAGTCTCCGAGGATCCTATGAATCAAGTTTCTCAAGTGTTTGAGAAGTCCTTGCAGTATGT
GAAGCGTTTTAGCCGGTACAAGAATCCAGATGCTGTTAGACAAGTTCGAGAAATCCTGAGTAGACACCAACTCACTGAGTTTGAGC
TCTGTGTTCTTGGCAATCTCTGTCCTGAAACTGCTGAAGAAGCAGTGGCAATGGTTCCTTCTCTCAAGACAAAAGGAAGAGCTCAT
AGTGATGAAGCGATTGAGAAGATGCTCAATGATCTCTCCCTTGTCAAGAGATTTGAGTAGTGCAGAAAGTTCTCGAGATCTAAGAT
TATAAACAGTTTAATTTGAGGGTGTTATATTCACCTTTTAGATGATGTCTTGAGTTAATTTTTCATGTCTGAAATTTAAAGCTTTC
CAGAATCTCTAGAATAATAACTTCATGTTTAATGAAATGTAGTTTACAATACTTTAATATGAAGCTGCAATTCTATCTTCCCTTGG
GAAAAA
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GenBank top hits (Blast detail) | Score | e value |
XP_002871392 RPB15.9 [Arabidopsis lyrata subsp. lyrata] | 687 | 3e-070 |
NP_196554 DNA-directed RNA polymerase II subunit D [Arabidopsis thaliana] | 686 | 4e-070 |
XP_002307132 predicted protein [Populus trichocarpa] | 661 | 3e-067 |
XP_002282413 PREDICTED: hypothetical protein [Vitis vinifera] | 658 | 6e-067 |
XP_002522014 DNA-directed RNA polymerase II, putative [Ricinus communis] | 651 | 4e-066 |
Swiss-Prot top hits (Blast detail) | Score | e value |
O15514 DNA-directed RNA polymerase II subunit RPB4 | 263 | 2e-022 |
Q9D7M8 DNA-directed RNA polymerase II subunit RPB4 | 263 | 2e-022 |
Q9VEA5 DNA-directed RNA polymerase II 16 kDa polypeptide | 224 | 6e-018 |
Q54S04 DNA-directed RNA polymerase II subunit rpb4 | 191 | 4e-014 |
O74825 DNA-directed RNA polymerase II subunit rpb4 | 160 | 2e-010 |
TrEMBL top hits (Blast detail) | Score | e value |
O48890 15.9 kDa subunit of RNA polymerase II | 686 | 2e-070 |
B9H5K4 Predicted protein | 661 | 2e-067 |
A5APH2 Putative uncharacterized protein | 658 | 4e-067 |
B9S7P5 DNA-directed RNA polymerase II, putative | 651 | 3e-066 |
C6SV83 Putative uncharacterized protein | 647 | 8e-066 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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