RadishBase

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Information for unigene UN18693

FASTA Sequence

Unigene ID: UN18693	Length: 1468	SSR
TTAGGAACATAAAAATCTTTATCTCAACAAAAAAAGAGCATTAAAATCTAATAAATGGGAGTTGTTTTGGATTTTTTTCGAAAAGT TAGCTACAAAAGAAAGAAAATTAGAAAGAAAAAGGAAACGAAGATGGTGAGAAGAAGAAGAAGAAAGAGTCCATTAATCATTCCAA TGTTTTCAAGAGCCTGAAGAGACCAGCTGCTTCACGAATCCGTGAAAAGTCAATGCAGAAAGCTTGAACTTCTATAAATAGATCCT TCACGTCGACGTTGTTGTTACGAATTAAACTTTGCAAGAAGACGCAAACAAGTCGAACAAGCCTATTCTGCATGTACTTGTCTTGC TGCTTGGCGTTCTCACAAGACGATATGCAATTAGTGATGTACACGCGAATAAATTCCTTGGGAAGCTCAACTGCAGTTGTGAGTCT GTTCACAACTTCCATCGAGTGCAAGCTCATGTCCATACTTACAAGAGCTGCGAAATAGTCAACAATCTCCGGAGAGTTAATCAACT TGGTCAGAATCTCAACTGCTATTTGAGGATTGTGCTCTACTAATTGCGGCAGCTTCCGTGGAGTTATTCCACAGTGATAGACAAGC TTTGGGTCATTTGCCGATGACGTAGTGATGTTCTCTTGCTCCGTAGGTGAAAGTGTCACCTTCAAACCCTTAACAAGTAAGTCCCT AACTGTTGAGCCTCTGCTAGTGTCAGCACACATTTTATCGTCCCAAATAAGCTCATGCTTGTTATCAGATCAATCCAAAGCAACTC GCTCTGATGAACTGGGTACCTAGGAGGACATGGACGGATCCACCTAGGAGCTAATCCCTCCGTTGTCAAACTTCCCAATATCCAGT TACGGCTTCATCTCTATCACCACATCCAATTTTGGGATTCCCACCAGGTTGCACATCAAACTCTGGAGAGTTAGGATCGCACCCAC GAGGAACATCAGGATCATGTACTAGCTTTTTGACGGCATAGTCTGCAGCTATGTGACTAGATGGTCCAGAACCAGCTTGAGAATCT CTTTAGATTTGTTGTAGCTATTCCATTGTAAGAGGTGGAGAATAAATGCTCTCTCATGCTTTTCCACCTGCTCATTACAAGCAGCA TTCATCATATCAGATACGAACGGGTTTACAGACGGTTTCTCGGAAGGATAACACTGGTACATGATAGCAAACGCAATTATACGATC AGTACTCCGTAGCAACTTCAGATCCTGTAAGAGCAGGGAAAGAGAGTAGCAGGCAGTGAAGTGGCGATCGCGTGGGAACTTGGAGT TGAATTCCGCCACGACGTCTTCGATAGGCCGGAGATCGGACTTGATCAGAGACCACACAGTCGCCGTTTCTTCTATATTCATTATC ATACTCGCCACTGTTGGATCAATCTCGCGGCGCTTAGACATTTGAGATTCCTTATTCAATATCTAGTTTGGATGGATGCTTATTTT TTTCCC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
XP_002873893 predicted protein [Arabidopsis lyrata subsp. lyrata]	930	6e-098
NP_850845 uncharacterized protein [Arabidopsis thaliana]	885	1e-092
NP_974802 uncharacterized protein [Arabidopsis thaliana]	885	1e-092
NP_197343 uncharacterized protein [Arabidopsis thaliana]	868	1e-090
AAM53304 putative protein [Arabidopsis thaliana]	865	2e-090

Swiss-Prot top hits (Blast detail)	Score	e value
Q9CWN7 UPF0760 protein C2orf29 homolog	642	7e-066
B0BNA9 UPF0760 protein C2orf29 homolog	642	7e-066
Q9UKZ1 UPF0760 protein C2orf29	641	9e-066
A4QP78 UPF0760 protein C2orf29 homolog	627	4e-064
Q1ZXI2 UPF0760 protein DDB_G0279005	473	3e-046

TrEMBL top hits (Blast detail)	Score	e value
Q3E7N0 Putative uncharacterized protein At5g18420.3	885	7e-093
Q3E9F1 At5g18420	885	7e-093
B4F7Q4 At5g18420	868	7e-091
Q8L846 Putative uncharacterized protein At5g18420	865	1e-090
B9GV90 Predicted protein (Fragment)	790	7e-082

Arabidopsis top hits (Blast detail)	Score	e value
AT5G18420.2 unknown protein	885	4e-095
AT5G18420.3 unknown protein	885	4e-095
AT5G18420.1 unknown protein	868	4e-093

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


12	3			100%

Unigene Members	Member information