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Information for unigene UN18694
| FASTA Sequence |
| Unigene ID: UN18694 | Length: 1550 |
SSR | | CGTCATATTCAAATGCATGAATATACACAAAATATACTTATTATTTAAACATATTCATATTCAAACACACAACGACGCAACAGGTG
CAACTTAAGAAACCAAGCTTCTGGCGCAAGAAACGTCTTACAATTCTTAAACCCTCAAAAACATCATAAACGAGCCAGATACTTAT
ATTCTTGGCTCTTATTACATTAATTTTTCATGAATTTAGAATAATTTCAGACAAAACAGATAAATACGATTTTTTAATAAAACAGA
TAATATAGTTTCCATACTTGTTCGTCTTCTGCTTATTAGATATCAGCAGAGAGATGTTCTTCTTGAGGCTTAAACCTGCAGAGTCT
GCAAGTAGGCGAGAACAGAGAAAGCGTTTGGTATTTGTCTTCTCCTCCCATCACAAGCATTGGAACACTAGTCTTGGCCGTGCTAA
CGTAATCAGGACGGTAGGTTTTCCCCAAAACACCCTCCACGAGCTCGCTTAGGTCTAAGAACTTGAACTGAGTCTCAAGATGCGCA
AAAGCATCATCTTGAGGCAACTGATAGCTGTGAACTCTGTCTTCTTCTTTCCCTATTGGTCTCACTTTGATGTCCATCTGAACAAG
ACCAGAGACAAGTACTCTCACGCTGTTTCTCTCGTCGGTTCTTTCGATGACGATCTCTCTTTGTCCCGAATTTGCCCTCCATTCGG
ATTCTTCGTCTTCAGTAGTGTGATGAGTTCGTCGTTGTATCTGATTGTAAAGGAGTCAGAGTTTCATCCCATTGTGTCACTCTATT
GGCTGTGATCACGAGCTTGTGGTTTCGAACATGACATTTAGGGCTTGCACCCATGTGAAGTCTCTGGTTCTTCCAACGGGTCTTGT
ATCAATGAAGTGAGCGTTGATCTGGAGGTTGTTGTCTGAAACGATCGCAAAGTTTCCTCCTTTGGATCCATGGAAATAGAACATCC
TACCATCTCCTCCGACAAATCTAGGGTCGTAGCATAGAGAACCGTAGCCGTTGCAGTTCGGTTTCCTCCATTTGCATGTAGCTTCG
CATTTGCTGGTGCAGTCAATGAAACAACCTTTAGTGTTTCTGTTCTTGGCGGACACATGGCCTGCTCTTGTCCTGTGGGCAACGGT
GAAAGCATCCTGTATCTTGTAGCCGCTTCACTCTGCTCCTTGTCCTTCTTCTCTTTCTCCTTCCTCTCTTTTTCCTTCTTTGCCTT
TTCTTCCTTGTCCTTCTTCTCTTTATCCTTCCTTTCCTTGTCCTTCTTTTTCTGATCCTCCTTGTCCTTCTTGTCCTTGTCCTTCT
TTTCCTTGTCCTTTGGACCGTTACCGTTACCATTACCTTTGCCATTACCATTGTCTACTTGCCCGTTGCCGTTATTACCGTTGCCT
TTCCCACCATCACTGGCAGCAATAACAACTTCGGTTAAGAGAAGCAATGCAAAGAGAGCGACAAGCACATACGACTTTCTGTGCTC
CATCTCTCAAGTTCAAGTATTCTTCTTTGGCTTCTTCTTCTTCTTTTTTGGCTTCTTCTTTAATTGCTAAAGATGTTTTTTTGTGT
CC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_200861 late embryogenesis abundant protein-like protein [Arabidopsis thaliana] | 1075 | 1e-114 |
| AAL06922 AT5g60530/muf9_180 [Arabidopsis thaliana] | 1069 | 5e-114 |
| XP_002530294 structural constituent of cell wall, putative [Ricinus communis] | 921 | 7e-097 |
| NP_200860 late embryogenesis abundant protein-like protein [Arabidopsis thaliana] | 907 | 3e-095 |
| XP_002530295 structural constituent of cell wall, putative [Ricinus communis] | 903 | 9e-095 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q869E1 DNA ligase 1 | 197 | 3e-014 |
| Q8I5D2 101 kDa malaria antigen | 156 | 2e-009 |
| P13816 Glutamic acid-rich protein | 154 | 3e-009 |
| P29974 cGMP-gated cation channel alpha-1 | 153 | 4e-009 |
| Q6BUE3 Protein PXR1 | 148 | 1e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FKJ4 At5g60530/muf9_180 | 1075 | 7e-115 |
| Q940M3 AT5g60530/muf9_180 | 1069 | 3e-114 |
| B9SWC5 Structural constituent of cell wall, putative | 921 | 5e-097 |
| Q9FKJ5 At5g60520 | 907 | 2e-095 |
| B9SWC6 Structural constituent of cell wall, putative | 903 | 6e-095 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G60530.1 late embryogenesis abundant protein-related / LEA protein-related | 1076 | 3e-117 |
| AT5G60520.1 late embryogenesis abundant protein-related / LEA protein-related | 907 | 1e-097 |
| AT5G54370.1 late embryogenesis abundant protein-related / LEA protein-related | 583 | 4e-060 |
| AT4G27400.1 late embryogenesis abundant protein-related / LEA protein-related | 576 | 3e-059 |
| AT1G54890.1 late embryogenesis abundant protein-related / LEA protein-related | 575 | 4e-059 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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