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Information for unigene UN18765

FASTA Sequence
Unigene ID: UN18765Length: 1187  SNP
TTTTTTTTCCAAAGTCTTGTGGCATGATTCAAGTGCTAAAAATATAAGTAATCTAAAACATAGCTTGTAGTCTAAAAGAAGAACGT
CATTAGCTCTTAGATTCCGAACAGCGAAATACCTTTAGGAGTTCTAGATTTCTCTAAGGAACCGCAAAAAAAAGGGTCTCAAGCTG
AAACTAATCTCTCTACATGAATGGAGTCCTACCGCCTCTTCGACTGTTCCTCTCGTATGCAGTGTTGAATTTGTCAACCACCTCGT
TCATGTTGCTGGTACAATTTGTGATCATTGCTAGGTAAGACATCAGCAATTTGTCGTTGTACTCCATTAAGAAATCCTCTTCAAAC
TTTTCTGATTGTGCGGCAGGCAGACTTCTGAGCAGACTAGCTACTTGCCTCAGAAGTGAGTTGTCGCAAGGAATATCACCTTTCTG
CATTGCGCCAAGGTATTGATGGAGCACTCTGATTCTGCTATTAAGCATCTTGATGGCACTGTGTATGCCAGTGAGATGAGCAGCCA
ATTGAGTCGCTGCTGAGCCTCCATCAGATGGCTTAAGGTGTGCAACATGATCAACCGATATTCTTTCAGCCTCGACAGTCTCGATT
GTGTAGCTTGCATTCACGAAAATTGGCTGAGGAATCCCATCAATGACATGGAATTCACTTTCATAGATAGTAACAGGGAGATCCTT
CTGAGCGTGATTGATAGCAGGATTCAAAAGGACATAAACAGGCGATTCATTAATGTCCATCAGAGCTTTGTGGATACTCATGTCAG
ATTCATTAGCATCGCTTCCAGTAGAGTACCATCCCAATATGTAGTAGTTAGGAAACACCTTCTGATAGAGCTCTTGCTTCTTCTCT
AAGAAGGATCTATCGAGAGTATCAGTAGTGGGATCTAACAGAAGCTCGAAGCTATTGAAGATCTCAACCGTCCGTCCTTTCTGGGC
ACCGATCACGCACCCATAAACCCTAAAATCCTGAGTGAGCGTCGTCGCGTCGCCGGTGCTGGGGTTATTCCCGGTCGCGCAGGAAG
AGGCTGGAGGGTTGAGCTGAGTTTTGACCCTAGTGAAGTGATCTGAGATGTTGAGCATCACCAAAGGGTGAAGCTTGAAGGTCAGG
CCGCTCGAGGAAGAAGGCGCCATTGATGTGTTGTCTCGAGAGAGGTTTTTTTTTTCTTTTTTAGTTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869611 hypothetical protein ARALYDRAFT_492170 [Arabidopsis lyrata subsp. lyrata]14351e-156
NP_567746 COP9 signalosome complex subunit 6b [Arabidopsis thaliana]14261e-155
AAL49561 COP9 signalosome subunit 6 [Arabidopsis thaliana]14162e-154
XP_002866135 hypothetical protein ARALYDRAFT_495718 [Arabidopsis lyrata subsp. lyrata]13902e-151
NP_568839 COP9 signalosome complex subunit 6a [Arabidopsis thaliana]13642e-148

Swiss-Prot top hits (Blast detail)Scoree value
Q8W1P0 COP9 signalosome complex subunit 6b14312e-157
Q8W206 COP9 signalosome complex subunit 6a13692e-150
Q54C92 COP9 signalosome complex subunit 65475e-055
Q6NUC2 COP9 signalosome complex subunit 65242e-052
Q07G98 COP9 signalosome complex subunit 65242e-052

TrEMBL top hits (Blast detail)Scoree value
Q1EC57 At5g5628013641e-148
B9ST91 Signalosome subunit, putative13202e-143
B6TEU8 COP9 signalosome complex subunit 6a12207e-132
C5YJ86 Putative uncharacterized protein Sb07g02838012191e-131
B6TWG6 COP9 signalosome complex subunit 6a12144e-131

Arabidopsis top hits (Blast detail)Scoree value
AT4G26430.1 CSN6B14321e-158
AT5G56280.1 CSN6A13702e-151
AT5G05780.1 RPN8A (RP NON-ATPASE SUBUNIT 8A)2383e-020
AT3G11270.1 MEE34 (maternal effect embryo arrest 34)2312e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
124  21%
 
66  32%
 
84  21%
 
102  11%
 
213  16%

Unigene MembersMember information