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Information for unigene UN18778

FASTA Sequence
Unigene ID: UN18778Length: 1022 SSR 
GGATTCGCTGCGCACTTGAACAAACTCTTGTCTCTCTGCTCTCTCTCTCTCTAGGCTGCCGGCAGTCGATCACTCCGCTTTGATTC
TGGTTAAGCTCGGAAGCTTTCGGAGTTTAAAGCTGATTCCCCTATCCAAGTTTTATATATAAAGACGATAGCCATGAGCTCGGTTT
TGCAGGGTTTTACGAAGTCGCTGGCAATGACTTTTGTCTCGGAGATTGGCGACAAGACATTTTTCGCCGCAGCTATATTGGCGATG
CGTTATCCAAGGAGACTTGTGTTGGCTGGTTGTGTATCTGCTCTTATTGTCATGACTATCCTCTCTGCTACTGTTGGATGGGCTGC
TCCTAATCTCATCTCTCGCAAGTGGACTCATCACATAACCACATTGTTGTTCTTTGGTTTCGGTCTTTGGTCTTTGTTGGACGGTT
TCAAAGGAGATGGAGGGGAATCAGAAGAATTGGCTGAAGTCGAAGCAGAACTGGATTCTGATTTGAAGGCTAATGGTAAAGCTACC
AAAGATAACAACAGTAAGACTGATGATGAAAACAAAAAAGAGAAAAGGCCATTCCTCGCACAATTCTTCTCTCCAATCTTTCTCAA
GGCATTTTCGATTAATTTCTTTGGTGAATTTGGTGACAAGAGTCAGCTTGCTACTATTGGTTTAGCCGCCGATGAAAATCCGTTTG
GTGTGGTCCTTGGCGGAATTGTCGCACAGCTATTGTGCACAACTGCTGCTGTGATCGGAGGAAAGAGCCTAGCTTCTCAAATATCC
GAACGAATAGTTGCTCTTTCTGGTGGAATGCTTTTCATTATTTTTGGCATCCAATCGTTTCTCACTTCTGTTGAGTGAGGTGGCTT
TGTAGTAGTGCAGATGATGACGATAAAGGAATGTCACTACCGATAGTTTCTTAGATGATTTAATACTTGATGTTAGATGTTTTACA
CAAGTGATTTAGAAAAAAACAAATCTCATCTACAGTAAAACAAAATACATTCAAACAGCCATATTTACTTCAATAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_173923 putative transmembrane protein [Arabidopsis thaliana]10415e-111
AAM65603 transmembrane protein, putative [Arabidopsis thaliana]10381e-110
XP_002893419 hypothetical protein ARALYDRAFT_335795 [Arabidopsis lyrata subsp. lyrata]10343e-110
XP_002887196 hypothetical protein ARALYDRAFT_475991 [Arabidopsis lyrata subsp. lyrata]9895e-105
NP_177032 UPF0016 protein 5 [Arabidopsis thaliana]9806e-104

Swiss-Prot top hits (Blast detail)Scoree value
Q4V899 Transmembrane protein 1654184e-040
P52875 Transmembrane protein 1654175e-040
Q9HC07 Transmembrane protein 1654158e-040
P38301 UPF0016 membrane protein YBR187W3745e-035
Q9P7Q0 UPF0016 membrane protein C186.05c1693e-011

TrEMBL top hits (Blast detail)Scoree value
Q9C6M1 Putative transmembrane protein10413e-111
Q8LA33 Transmembrane protein, putative10388e-111
Q9SX28 At1g686509804e-104
B9ST29 Transmembrane protein TPARL, putative9421e-099
B9HWL1 Predicted membrane protein9178e-097

Arabidopsis top hits (Blast detail)Scoree value
AT1G25520.1 unknown protein10412e-113
AT1G68650.1 unknown protein9802e-106
AT5G36290.1 unknown protein2312e-019
AT5G36290.2 unknown protein2312e-019
AT4G13590.1 unknown protein1666e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
114  57%
 
63  43%

Unigene MembersMember information