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Information for unigene UN18780

FASTA Sequence
Unigene ID: UN18780Length: 1461 SSR 
GGAGGAACGTGAAGAATCGTAGAAAGAGGGAGAGAGAGAGAGGAAGAAGTTGAGTGTCCTATAAAGCGTGAATCAAATCCGCTCTA
ACCACATCTTTCTCGGAGAAGGATCTAAAAACCTGCATTTGATCCATCTTAGAGATCTGAATCAGAATTGACTAAGAGATAGAGAG
AGAGATGGCGGCGGAGAACGAGCAGCGGAAGTCTTCAGCGGTCTCCGACATGGGAGCTTGGGCAATGAACGTGATAAGCTCCGTTG
GGATCATCATGGCCAATAAACAGCTCATGTCCTCTTCCGGTTTCTCCTTCAGCTTCGCAACGACTCTCACCGGCTTCCACTTCGCT
CTAACCTCATTGGTCGGATTCGTCTCAAACGCGACGGGGCTCTCCGCGTCCAGGCACGTCCCAACGTGGGAGCTGATCTGGTTCTC
AATCGTCGCCAACGTCTCCATAGCCGCCATGAATTTCAGCCTCATGCTCAACTCCGTCGGATTCTACCAGATCTCGAAGCTGAGCA
TGATCCCCGTCGTCTGCGTCATGGAATGGATCCTCCACAGCAAACGCTACTCCAGGGAAGTTAAAGTGTCTGTTGTGGTTGTTGTG
GTCGGCGTTGGGATTTGCACCGTCACTGACGTCAAAGTTAACGCCAAAGGGTTTATATGCGCGTGTGTAGCTATTTTCTCCTCCTC
TTTGCAACAGATTTTAATAGGTTCCTTGCAGAAGAAATATTCGATTGGATCTTTCGAGTTGCTGAGTAAAACAGCGCCGATTCAAG
CTGTTTCGCTTCTCGTTGTTGGTCCTTTTGTTGATTATCTCCTCAGTGGCAAGTTCATCTTGAGCTACAACATGTCTTCTGGTTGC
TTTGTATTCATCCTTCTCTCATGTGCCTTGGCTGTGTTCTGCAACATAAGCCAGTACCTTTGCATCGGGCGATTTTCAGCGGTATC
GTTCCAGGTTATAGGCCACATGAAAACCGTGTGTATCTTGACGCTGGGATGGCTCCTCTTTGATTCTGCTATGACTTTCAAAAACG
TGTCCGGCATGTTTGTTGCCATTGTTGGGATGGTGATCTATAGCTGGGCCATGGAATTGGAGAAACAGTCTAATCTCGCGGCAAAG
GCTTTGAACAGTGTGAAACACAGCTTGACTGAAGAGGAGTTTCAGCTTTTAAAGGAAGGTGTGGAAACTACACAGTCCAAAGATGT
TGAGCTTGGCGGCGGCTACACAAAAGCTTAGTAAGAGATGATGGATAGTAAACATAGTTTTCTGGTACAAGTTCTTCTGTGTTAAA
GTTGTTATGTTTTTGTGTTATTTAAACCAAAAGGGTGGTGGTCGAAATAAAGCAAAGATCAAATCCTCCCCCATAAAGGATTCTAG
GAGATTAGTCTACGCTTCGAACTATGTCCCTTTGTTATAAAAAGATGTTTTGTGTTATTTATATATTTACTAGCTAATTCCATGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_199057 Nucleotide-sugar transporter family protein [Arabidopsis thaliana]16394e-180
XP_002865527 hypothetical protein ARALYDRAFT_917531 [Arabidopsis lyrata subsp. lyrata]16313e-179
XP_002278064 PREDICTED: hypothetical protein [Vitis vinifera]14333e-156
NP_565138 Nucleotide-sugar transporter family protein [Arabidopsis thaliana]14298e-156
NP_564133 nucleotide-sugar transporter-like protein [Arabidopsis thaliana]14252e-155

Swiss-Prot top hits (Blast detail)Scoree value
Q8RXL8 Uncharacterized membrane protein At1g068905673e-057
Q18779 UDP-sugar transporter sqv-71722e-011
Q9VR50 Solute carrier family 35 member E1 homolog1623e-010
Q54YK1 Putative UDP-sugar transporter DDB_G02786311481e-008

TrEMBL top hits (Blast detail)Scoree value
Q9FIH5 At5g4242016393e-180
Q9SRE4 At1g76670/F28O16_414296e-156
Q9LPU2 At1g2107014252e-155
Q8LG49 Putative uncharacterized protein14181e-154
C6TJD2 Putative uncharacterized protein14001e-152

Arabidopsis top hits (Blast detail)Scoree value
AT5G42420.1 transporter-related16391e-182
AT1G76670.1 transporter-related14293e-158
AT1G21070.1 transporter-related14259e-158
AT5G42420.2 transporter-related8102e-086
AT4G09810.1 transporter-related7762e-082

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  14%
 
104  57%
 
72  29%

Unigene MembersMember information