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Information for unigene UN18782

FASTA Sequence
Unigene ID: UN18782Length: 1544  SNP
GGACAGTCTCCCTTCGATTTCTCCGCTTCCTCACTCTCTCCCTCCCTTGGAAAAAAAGAAGAAGAAATGGCAGCGAGAATCCATGG
AGGAGCTGGAGCTGCTACGTCTTTGTCGACGTTTAATCCGAAGAAACTCGTTGCTCCTCCTTCTCGCACCAATCTCCCAGCGAGGA
GCAGCAAGAGATGCATTGTGTCTGCTGCTGCTAGATCTGATGGGAGTAAGAAGAGCCTCCTCCGAGTTCGTCACTCTCAGAAACTG
ATTGCCAATGCTGCTGTTGCCACCAAGGCGGAGGAGTCATCTGCCCCCACTGGCACTGGACATGAACTACTGCTTTTCGAGGCTCT
TCAGGAAGGTCTTGAAGAAGAGATGGACAGAGATCCACATGTATGTGTTATGGGTGAAGACGTGGGCCACTACGGTGGCTCCTACA
AAGTTACCAAAGGCCTTGCTGATAAGTTCGGCGACCTCAGGGTTCTCGACACTCCTATTTGTGAAAATGCATTCACTGGTATGGGC
ATTGGAGCCGCCATGACTGGTCTAAGACCCGTCATCGAAGGTATGAACATGGGTTTCCTCCTCCTGGCCTTCAACCAAATCTCCAA
CAACTGTGGAATGCTTCACTACACATCTGGTGGCCAGTTCACTATCCCCGTTGTCATCCGTGGTCCCGGTGGAGTGGGACGCCAGC
TTGGCGCTGAGCATTCCCAGCGGCTAGAGTCTTACTTCCAGTCCATTCCTGGGATCCAGATGGTTGCTTGCTCGACTCCTTACAAC
GCCAAAGGCTTGATGAAAGCTGCGATCAGGAGCGAGAACCCTGTGATTCTGTTTGAGCACGTTCTGCTTTACAACCTCAAGGAGAA
AATCCCGGATGAAGAGTACATATGTAACCTTGAAGAAGCTGAGATGGTCAGACCTGGAGAGCACATCACCATCCTCACTTACTCCC
GGATGAGGTACCATGTGATGCAGGCAGCTAAAACTCTGGTGAACAAAGGGTATGACCCTGAGGTTATCGACATCAGGTCGCTGAAA
CCGTTTGATCTTCACACGATCGGGAACTCGGTTAAGAAAACGCACCGGGTTTTGATCGTGGAGGAGTGTATGAGAACCGGTGGGAT
TGGAGCTAGTCTTACTGCTGCAATTAATGAGAACTTTCATGACTATTTAGATGCTCCGGTGATGTGTTTGTCTTCTCAGGACGTTC
CTACACCGTACGCTGGTACACTGGAGGAGTGGGACCGTTGTTCAACCGGCTCAGATCGTGACTGCTGTTGAGCAGCTTTGCCAGTG
AAAATCGTATTTTATCCGGTGAGCCATTGTTTACCATATTTACCTCTCCATTTACTTTCTCTTTAGCTTAGTTCGCAAGAACTTGT
CTGTTTGATTTTGTTAACGTTTTGTTGTCCCTTTTCTTGTGTTTTGAAGCTCATACTGTTTCGTTTGTTAATCCATCTTTCACATT
TTTATTTTTATCCTATGAATCTTCATTACCTTTAGCTATAAACACATACACAACTCATTCTGTGTTTAGTAATCTTCTCTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAB86804 pyruvate dehydrogenase E1 beta subunit [Arabidopsis thaliana]17722e-195
NP_174304 pyruvate dehydrogenase E1 beta [Arabidopsis thaliana]17712e-195
XP_002893601 pyruvate dehydrogenase E1 beta subunit [Arabidopsis lyrata subsp. lyrata]17604e-194
XP_002881346 transketolase family protein [Arabidopsis lyrata subsp. lyrata]17112e-188
NP_181006 pyruvate dehydrogenase E1 component subunit beta [Arabidopsis thaliana]17084e-188

Swiss-Prot top hits (Blast detail)Scoree value
Q32RM2 Pyruvate dehydrogenase E1 component subunit beta13131e-143
Q32RS0 Pyruvate dehydrogenase E1 component subunit beta13121e-143
Q8MA03 Pyruvate dehydrogenase E1 component subunit beta12816e-140
Q1ACL0 Pyruvate dehydrogenase E1 component subunit beta12484e-136
P51266 Pyruvate dehydrogenase E1 component subunit beta11704e-127

TrEMBL top hits (Blast detail)Scoree value
O24458 Pyruvate dehydrogenase E1 beta subunit17721e-195
Q9C6Z3 At1g30120/T2H7_817711e-195
O64688 At2g3459017083e-188
Q8LAI3 Putative pyruvate dehydrogenase E1 beta subunit17048e-188
B9IJS2 Predicted protein16662e-183

Arabidopsis top hits (Blast detail)Scoree value
AT1G30120.1 PDH-E1 BETA (PYRUVATE DEHYDROGENASE E1 BETA); pyruvate dehydrogenase (acetyl-transferring)17753e-198
AT2G34590.1 transketolase family protein17081e-190
AT5G50850.1 MAB1 (MACCI-BOU); catalytic/ pyruvate dehydrogenase (acetyl-transferring)6623e-069
AT1G55510.1 BCDH BETA1 (BRANCHED-CHAIN ALPHA-KETO ACID DECARBOXYLASE E1 BETA SUBUNIT); 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)/ catalytic5306e-054
AT3G13450.1 DIN4 (DARK INDUCIBLE 4); 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring)/ catalytic5119e-052

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  20%
 
81  7%
 
115  33%
 
104  27%
 
122  13%

Unigene MembersMember information