 |
Information for unigene UN18786
| FASTA Sequence |
| Unigene ID: UN18786 | Length: 1268 |
| SNP | GGATACATGCTCCTTGTCGATGGTGGTATGATGTCGTTTATGGTGAAGTCTAAGACTAAAGAGACTGTCACATGTGAAGTTGTTGA
TGGTGGAGAACTTAAGTCAAGGAGACACTTGAATGTCCGAGGGAAAAGTGCTACATTGCCTTCAATCACTGAGAAGGATTGGGAGG
ATATTAAGTTCGGAGTGGAGAACAAAGTTGACTTCTATGCAGTTTCTTTTGTCAAAGATGCACAAGTGGTACATGAACTCAAGAAA
TACCTTCAAGGCTGTGGTGCCGATATTCATGTGATTGTAAAAATTGAAAGCGCAGACTCCATACCTAACTTGCATTCCATTATCAC
CGCATCAGATGGGGCAATGGTTGCAAGAGGTGATCTTGGTGCAGAGCTTCCTATTTAAGAAGTACCCATTCTTCAGGAGAGGATCA
TTAACCTATGCCGCAGCATGGGAAAAGCTGTTATTGTTGCGACTAACATGCTTGAGAGTATGATAGTTCACCCAACTCCAACCCGG
GCGGAGGTTTCTGACATTGCTATAGCTGTTAGAGAAGGTGCTGATGCAGTAATGCTTTCAGGAGAAACTGCTCACGGAAAGTTCCC
GTTGAAAGCTGCTGGAGTGATGCATACAGTTGCACTGCGAACAGAAGCAACCATTACTACTAGTAGTGAAATGCCACCTAATCTTG
GTCAAGCCTTCAAGAACCATATGAGTGAGATGTTTGCATACCATGCAACCATGATGTCGAACACACTTGGAACTTCAACTGTTGTT
TTCACCAGGACCGGTTTCATGGCCATACTTTTGAGTCACTATCGCCCTTTTGGCACAATTTATGCCTTCACAAATGAGAAAAAAAT
ACAGCAAAGATTAGCCTTGTATCAAGGTGTGTGCCCCATATATATGGAGTTTTCAGATGATGCAGAGGACACTTTCACTAAAGCTT
TGTCTACACTACTGAAACAAGGAATGGTGAAGAAGGGAGAGGAAATAGCGATTGTACAGAGCGGTTCACAACCAATCTGGCGGTCT
CAATCGACTCATAACATCCAAGTCCGCAAGGTGTAAAGCCTTTTAAGGAGTCTCGGTATTTATTTTCACATGGTCAGTGTTTTTTT
TGTTTCATTTATCTGTAAAACCGGTTTCGGTTAACTTTCCTTGCACGTACGTCCTTTTGTACTCTAAAACCTACGGTTTACTGTAT
CTTATTCAGTTTGTTTTACTTGGCAGACGTTATTGTTTTTTTTTTTCCCTCAATGATTTATTAG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002864200 hypothetical protein ARALYDRAFT_495356 [Arabidopsis lyrata subsp. lyrata] | 1696 | 8e-187 |
| NP_200104 pyruvate kinase [Arabidopsis thaliana] | 1693 | 2e-186 |
| AAK82461 AT5g52920/MXC20_15 [Arabidopsis thaliana] | 1688 | 6e-186 |
| BAD93771 pyruvate kinase [Arabidopsis thaliana] | 1688 | 6e-186 |
| XP_002513613 pyruvate kinase, putative [Ricinus communis] | 1605 | 3e-176 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P55964 Pyruvate kinase isozyme G, chloroplastic (Fragment) | 1361 | 2e-149 |
| Q40546 Pyruvate kinase isozyme G, chloroplastic | 1350 | 4e-148 |
| P00548 Pyruvate kinase muscle isozyme | 563 | 8e-057 |
| O62619 Pyruvate kinase | 559 | 2e-056 |
| P11979 Pyruvate kinase isozyme M1 | 547 | 6e-055 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G52920.1 PKP-BETA1 (PLASTIDIC PYRUVATE KINASE BETA SUBUNIT 1); pyruvate kinase | 1698 | 2e-189 |
| AT1G32440.1 PKp3 (plastidial pyruvate kinase 3); pyruvate kinase | 1332 | 5e-147 |
| AT3G22960.1 PKP-ALPHA; pyruvate kinase | 726 | 9e-077 |
| AT5G56350.1 pyruvate kinase, putative | 431 | 1e-042 |
| AT4G26390.1 pyruvate kinase, putative | 425 | 7e-042 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
