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Information for unigene UN18800

FASTA Sequence
Unigene ID: UN18800Length: 1560 SSR 
GGATCAGACAGAATCACAGAACACAGAAAAAAATAAGAAGAGAGAACTCAAAAGAGAGATTTGCTATTTTCGGCAAGGAAGAGAGA
GAGAGTGTGTTTTCTAGGGTTTCTAGTTGCTTCTGAAACAAAAAAAGATGGTGGAGTGAAACTGCGACGGAGACATTTCAGATTTA
ACACGAATTGAGGATTTGAAGTTGTTGAGAATGGCTTCTGTGGGAACATTACCTTCTTCTACGGCTGCTACGAAACAGAACAATGA
TTCTGTATGTGTTGACAAACTACTGCCGGAAGGGATTAATGAGATGAAGATTAAAGATGATAAGGAAATGGAAGCAGCTGTGGTTG
ATGGGAATGGAACTGAGACAGGTCACATCATTGTTACAACCATTGGCGGTAAAGATGGTCGGCCTAAACAGACCATAAGTTACATG
GCAGAGCGCATCGTTGGACAAGGTTCATTTGGAATCGTCTTTCAGGCGAAGTGTTTAGAGACGGGGGAAACTGTTGTCTCCCTCAA
GCATTGCTTTTTCTCAACGACCGAGAGAGACGAGCTGTATCTCAACTTGGTCCTTGAATACGTTCCTGAGACTGTCTACCGCGTCT
CAAAGCACTACAGTCGGGCTAACCAGAGGATGCCCATGATATATGTCAAACTCTATACATATCAGATTTGCAGAGCTTTGACATAC
ATTCATGGAGGAGTAGGAGTCTGCCACAGAGACATAAAACCACAGAATCTTCTGGTTAATCCTCATACACATCAGGTCAAGCTCTG
CGACTTTGGTAGCGCTAAAGTTCTGGTGAAAGGCGAACCAAACATCTCATACATCTGTTCCCGTTACTACCGAGCACCTGAGCTTA
TATTTGGAGCTACAGAATACACAACAGCTATTGACATATGGTCTGCAGGGTGTGTTCTTGCTGAGTTGCTCCTTGGACAGCCTCTG
TTTCCAGGTGAGAGTGGAGTCGACCAACTAGTGGAGATCATCAAGGTTCTTGGAACGCCAACTCGAGAGGAAATCAAATGTATGAA
TCCAAACTACACTGAATTCAAGTTCCCTCAGATAAAGGCTCACCCTTGGCACAAAATATTCCATAAGCGTACACCTCCAGAAGCTG
TAGATCTCGCCTCAAGACTTCTCCAGTATTCTCCAAACCTCAGATCAACCGCTATGGAGGCAATAGTTCACCCGTTCTTCGATGAG
CTACGTGATCCCAATACACGTCTACCCAATGGTCGTCCCTTGCCTCCTCTCTTCAACTTCAAACCTCAAGAGCTTAAAGGAGCAAG
CGTAGAGCTGTTGTCCAAGCTTATACCTGAACACGCCCGAAAGCAGTGTTCCTTCCTCGCTGTCTGAGTGACTAAACCTCTCTGTG
TGTATGTATGTATGTATGTATGTACACATGCGTTTGCTTAAGTAATGGAGTTAGCCCGTTCTCAAAGATTATTATTGTTAGCTTTT
AATCTTTTATGAATGTAGCCTGTGTCGTTTATTGTCAGGGTCCCACGGATGATCGATCAAACATTATTTATTTATCGAAAAAGCTA
TGTTCTCTACCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002873682 kinase family protein [Arabidopsis lyrata subsp. lyrata]14827e-162
NP_196968 Shaggy-related protein kinase epsilon [Arabidopsis thaliana]14791e-161
ABK24355 unknown [Picea sitchensis]14226e-155
XP_002276754 PREDICTED: hypothetical protein [Vitis vinifera]14182e-154
CBI34900 unnamed protein product [Vitis vinifera]14182e-154

Swiss-Prot top hits (Blast detail)Scoree value
Q8VZD5 Shaggy-related protein kinase epsilon14796e-163
P43288 Shaggy-related protein kinase alpha13685e-150
P43289 Shaggy-related protein kinase gamma13641e-149
P51139 Glycogen synthase kinase-3 homolog MsK-313551e-148
P51137 Glycogen synthase kinase-3 homolog MsK-113471e-147

TrEMBL top hits (Blast detail)Scoree value
A9NUP4 Putative uncharacterized protein14224e-155
A5AGP7 Putative uncharacterized protein14028e-153
B0FSK1 Serine/threonine protein kinase14011e-152
B9I9E1 Predicted protein13973e-152
B9GSY1 Predicted protein13912e-151

Arabidopsis top hits (Blast detail)Scoree value
AT5G14640.1 SK13 (SHAGGY-LIKE KINASE 13); ATP binding / protein kinase/ protein serine/threonine kinase14804e-164
AT5G26751.1 ATSK11; protein kinase/ protein serine/threonine kinase13693e-151
AT3G05840.2 ATSK12; protein kinase/ protein serine/threonine kinase13659e-151
AT3G05840.1 ATSK12; protein kinase/ protein serine/threonine kinase13659e-151
AT1G09840.1 ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41); ATP binding / protein kinase/ protein serine/threonine kinase12815e-141

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
66  67%
 
81  11%
 
71  11%
 
111  11%

Unigene MembersMember information