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Information for unigene UN18804

FASTA Sequence
Unigene ID: UN18804Length: 1196 SSR 
AATCACATATATTTGGTTTATATGATTAAGTTAATGAACATGAAGTCCAACTAACAAATCAAAACCCAAATCCAAATATCTAACGT
GTATATTTGTAACTTTATACAAGTTTCTCAAATCACACACATTAAACATCCATTTCTCATTCACACTAACTCTATTTTTAGCATAT
GAATACATTGCTAAAAAATAGTTCCAACAAAAAGGGGGTACAAATATTTAACTTTTCTACCCGTTTAAAACACTGGGAATATCTTT
CTTACAGGCTTAAAATTTAAGGGGAACATGTTTTATTTTTGGTCATGTTACTGAAACCGATTTGGTGAATCGTAAAAAGGATTTTA
AATAAAAAATAAAAGAAAAACTAATGTTCCTCTCGGATCTAAAGTTTTTTCCTGGCTAGAGAAGAGAGAACAAAAGAAGGTGTTTT
TGTGGCTTTCTTGGAGTTTGTAGCTTTTGGGCTATAAACCCTTTTGTAACTTTGATCTATTATTCCTCCGGTGCTCTTACATGCCT
TTCTTCTTGCTTTATTACTTGTATTTTTAAAACCTCTCTTCATAAGATCTTCAAGACTTTTAACATTTGCTAGTGATGTGAATGAT
TGAGATTTTCCTTCATAAAACTTTGACAATCCCCTCCTGCCAAAAGATTAAAACAACTTTTGTTAGAAAACAAATATCAATAAAAA
CAGACAATCTTTGAGATAGTTGAGATCTTGAGATGGATATCTTTAGATCCATTTATCATTAAGTATAAAGAAAACCTATATCAATT
GCTTCAGAGAGAAGTTTTTAAGAGATTAATATGATCAGAGAATGTTTTCTTACTTGATTGGGAGGTGTAACATGAGGTCAGAGAGA
TCTCCAAGAGGTCCATTTGAAAAAGATGAAGAAGCATCATCATCCTCCTCTGTTAAATCAGATGAACACATGGAAGATAATGAACA
AGATGACAAATCTTCTTCTTCCCCGGAGAATGTTTCAGCTTCTAACATCGATCTTGAAACTCCTTCAACAAGGTCTTCTTCTTCTT
CTGTCCTACTTGAATCTTGATAGATCATTTTGCCCATGTGCTTTATATGCAGATTCATCTTTCAACAGAAATCAAAGAAAAACGAA
TTCTTGAAACAGGATAAGAAACAGAGCAAGAGAGTTCTTATGTCAAGATGTGTGTTGTTGTTCTACAATTGGGAACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866155 predicted protein [Arabidopsis lyrata subsp. lyrata]3231e-027
NP_200466 oxidative stress 3 [Arabidopsis thaliana]3176e-027
XP_002280262 PREDICTED: hypothetical protein [Vitis vinifera]2012e-013
CBI27985 unnamed protein product [Vitis vinifera]2012e-013
XP_002514205 conserved hypothetical protein [Ricinus communis]1662e-009

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LVB9 Emb|CAB83157.13174e-027
B9RKG1 Putative uncharacterized protein1661e-009
C6SYZ5 Putative uncharacterized protein1661e-009
C6T479 Putative uncharacterized protein1661e-009
C6TFU8 Putative uncharacterized protein1652e-009

Arabidopsis top hits (Blast detail)Scoree value
AT5G56550.1 OXS3 (OXIDATIVE STRESS 3)3172e-029
AT4G26288.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: OXS3 (OXIDATIVE STRESS 3) (TAIR:AT5G56550.1); Has 272 Blast hits to 170 proteins in 34 species: Archae - 0; Bacteria - 10; Metazoa - 90; Fungi - 21; Plants - 81; Viruses - 2; Other Eukaryotes - 68 (source: NCBI BLink).1263e-007
AT4G26290.1 unknown protein1237e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  33%
 
72  67%

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