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Information for unigene UN18831

FASTA Sequence
Unigene ID: UN18831Length: 873 SSR 
GGAGTGATTGTTTCGAGCTTTGCTGTCAAGTTTCTGCTTCTTCCGTGGAAATGGGGGATGAAGTATTTTTGGGATACTCTTCTGGA
TGCTGATTTGGAATGTGACATCATTGGGTGGCAGTATATCTCCGGGAGCTTACCTGATGGCCACGAGCTTGATCGCTTGGACAATC
CCGCGATACAAGGTGCAAAGTATGATCCGGAAGGCGAGTACATAAGGCAATGGCTTCCCGAGCTGGCGAGAATGCCAACAGAATGG
ATCCATCATCCATGGGACGCTCCATCAACTGTACTGAAAGCTTCCGGAGTAGAACTCGGAGCAAACTATGCGAAACCCATTGTAGA
TATCGACACAGCTAGTGAGCTGCTTACCAAAGCCATATCAAGAACCCGTGAGGCACAGATCATGATTGGAGCAGCACCTGATGAGG
TTGTAGCTGATAGCTACGAGGTCTTAGAGGGTAATACTGTGAAAGTACCCGGTGTTTGCCCGTCTGCGTCTTCTAATGACCAGCGC
GTACCTTCGGATGTTCGTTACAATGGGTCAAGAGAGTGAAACCTGCAGAAGAAGAAGAAGAGAGGGAGATTAAGAGATGTAGAGAA
GAAAGGGACTTGTTTTCCACTGCCGAGTCTTCTTCTTCTGATGGTTAGAAGCGTGTTCTTGGGTTCGCATTCTTGCTCGTTGGTAT
CAGAAGGAAAGAACTTGGAATTACTACTAGAAGCTTTGTAAGAAATGGTTAAAAGCTGTTATTACAAAACCTAACACGTTGTATAT
CTAGTGTGTATGTGTGTCTTGATTCGTTATTACATCGCTGATAACTACGGTCTGTCAACGGATATGTAAGGATGAAGATATAGAAG
TTGTTTTATGTGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAC67177 cryptochrome 2 [Armoracia rusticana]9545e-101
BAC67176 cryptochrome 2 [Armoracia rusticana]9536e-101
BAC67178 cryptochrome 2 [Armoracia rusticana]9501e-100
BAC67179 cryptochrome 2 [Armoracia rusticana]9455e-100
BAJ15782 cryptochrome2 [Cardamine nipponica]9455e-100

Swiss-Prot top hits (Blast detail)Scoree value
Q96524 Cryptochrome-29372e-100
P40115 Cryptochrome-17274e-076
Q43125 Cryptochrome-15152e-051
P00914 Deoxyribodipyrimidine photo-lyase2292e-018
P77967 Cryptochrome DASH2222e-017

TrEMBL top hits (Blast detail)Scoree value
Q84L83 Cryptochrome 29543e-101
Q84L84 Cryptochrome 29534e-101
Q84L82 Cryptochrome 29509e-101
Q84UJ4 Cryptochrome 29454e-100
B0LQ55 At1g04400-like protein (Fragment)9392e-099

Arabidopsis top hits (Blast detail)Scoree value
AT1G04400.2 CRY2 (CRYPTOCHROME 2); blue light photoreceptor/ protein homodimerization9372e-101
AT1G04400.1 CRY2 (CRYPTOCHROME 2); blue light photoreceptor/ protein homodimerization9372e-101
AT4G08920.1 CRY1 (CRYPTOCHROME 1); ATP binding / blue light photoreceptor/ protein homodimerization/ protein kinase5152e-052
AT3G15620.1 UVR3 (UV REPAIR DEFECTIVE 3); DNA (6-4) photolyase1881e-014
AT5G24850.1 CRY3 (cryptochrome 3); DNA binding / DNA photolyase/ FMN binding1477e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
73  100%

Unigene MembersMember information