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Information for unigene UN18833

FASTA Sequence
Unigene ID: UN18833Length: 1032 SSR 
GGAATAATCCTAAGCGTGCCATAACTCTCACAACACTGTTCAAAAACCCTCTCTCTCTCTCTCGCCGTCTTGTTCTCTCATAAACT
CTTGGACTCGCTTCTTCTCGATCTCCGCAGCTTCGGTTTCGTCAATGGCTTTACCGAACCAGCAAACCGTCGATTACCCTAGCTTC
AAGCTCGTCATCGTTGGTGATGGAGGCACAGGAAAAACCACGTTTGTCAAGAGACATCTCACTGGAGAGTTTGAGAAGAAATATGA
ACCCACTATTGGTGTTGAGGTTCACCCTTTAGATTTCTTCACTAACTGTGGCAAGATCCGGTTCTACTGTTGGGATACTGCTGGAC
AAGAGAAGTTTGGTGGGTTAAGGGATGGATACTACATCCATGGTCAATGTGCCGTCATCATGTTTGATGTCACAGCACGTCTGACA
TACAAGAATGTTCCAACATGGCACCGTGATCTTTGCAGGGTCTGTGAAAACATCCCGATTGTACTCTGTGGAAACAAAGTTGATGT
GAAGAACAGGCAAGTGAAGGCGAAGCAGGTGACATTCCACAGGAAGAAGAATCTCCAGTACTACGAGATATCTGCCAAGAGCAACT
ACAACTTCGAGAAGCCCTTCTTGTACCTTGCTAGGAAACTCGCCGGGGACCCTAACCTTCACTTTGTGGAATCACCTGCCCTTGCT
CCCCCAGAAGTACAGATTGACATGGCTGCTCAGCAACAGCATGAGGCAGAGCTCGCAGCCGCAGCAAGTCAGCCACTCCCTGATGA
CGATGATGACACGTTCGAGTAGAGAGAGAGAGAGACGCTATTATCATTTCTTGTTTTTTTCTCTAGTGGAGCTATTTCTGTTTGTG
TTTGTATTCTTCAAGATATGAAGTTTGAAAATCTGAGGTTTGCGATGGCACTAGTCATTTCCATTCGGAGTCTTTCTGATACTAGT
TGAAGCAAAAGCCAAGCTTTCTTATAAAAAAGCACCTTTTTTGGTAACCTTTTTTCTTATTAAGAACACTAAGTTATTACTTGCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CBI21000 unnamed protein product [Vitis vinifera]11912e-128
AAM12880 GTP-binding protein [Helianthus annuus]11903e-128
CBI28152 unnamed protein product [Vitis vinifera]11903e-128
NP_200330 GTP-binding nuclear protein Ran-3 [Arabidopsis thaliana]11841e-127
XP_002864382 hypothetical protein ARALYDRAFT_918663 [Arabidopsis lyrata subsp. lyrata]11832e-127

Swiss-Prot top hits (Blast detail)Scoree value
Q8H156 GTP-binding nuclear protein Ran-311846e-129
P41918 GTP-binding nuclear protein Ran-A111748e-128
P41917 GTP-binding nuclear protein Ran-211586e-126
A2WSI7 GTP-binding nuclear protein Ran-111523e-125
Q7F7I7 GTP-binding nuclear protein Ran-111523e-125

TrEMBL top hits (Blast detail)Scoree value
Q8S2Z7 GTP-binding protein11902e-128
B9RP86 Ran, putative11768e-127
Q9FSZ5 GTP-binding protein11732e-126
A9PA03 Predicted protein11722e-126
C6SW66 Putative uncharacterized protein11713e-126

Arabidopsis top hits (Blast detail)Scoree value
AT5G55190.1 RAN3 (RAN GTPASE 3); GTP binding / GTPase/ protein binding11854e-130
AT5G20020.1 RAN2; GTP binding / GTPase/ protein binding11594e-127
AT5G20010.1 RAN-1; GTP binding / GTPase/ protein binding11406e-125
AT5G55080.1 AtRAN4 (Ras-related nuclear protein 4); GTP binding / GTPase/ protein binding7912e-084
AT5G39620.1 AtRABG1 (Arabidopsis Rab GTPase homolog G1); GTP binding2501e-021

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  40%
 
74  40%
 
121  10%
 
191  10%

Unigene MembersMember information