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Information for unigene UN18840
FASTA Sequence |
Unigene ID: UN18840 | Length: 843 |
| SNP | ATAAAAGATGCTCATGCTAAAAATACATATCAAATGTAAAATTAATTAAACAAAGTTTAACAACTTTCACTATTTAGGTGACGAAT
ATTATATTTTTAATTGAACAAAGGCACAAATATGTTCCAAGAACAACTAAGTAAACAATACATAGAAATGCACCACAATGCTATCT
TCTTAATGAGCTTGAATGCTTTCTCCAAACTTGTGGGTTAAGCTCTTTATATACTCCTTCCTAACCGGGTGATCTTCCTGCGGACG
GTTATATGGTGTCCACACCGGTTCTCCCACAAACAGCCTCATTAGCTTGATGTAGTTGCTGGTGTCGAGTGTGAACCGGTGGTAGA
TCCCGGCAGGAAGGACAATGAGATCGCCCGGTTTCATCCAAATTCGGATCCAACGGTCATCCTTGTCCCTAACATCAAAATAGCCA
CTTCCTGCAAGGCAGTAGCGAATCTCTTCGTCCTTGTGAATGTGTTCTGTGAAAAAGTTCTTCAGCTTCTCCTCGTAGTTGCTGAC
TTTCTCGGGACACAGATCCAGCAAATCCATGTAATCGTAACCCCTTTCATCTCTAATCTTGGCTAGCTCGGAATCATTCTCGTAGT
TCTCAGGGTTCAACTTCCAGTACAATACTCCCAGTTCTGCCAAGTAATCCATAGGGAGGAGCTCTTTGGGGTTAGGATGATGAGGA
AGTCTCTGATCTTCATTGCTATCATCCATTAACCATGCCTCGAGAGCCATTCTTGATCTTCGTTCTGTCTGTGTGAGTGCTTCGAT
TTCAATCTCATCTCCACTAATGACGATGAAGAGGTACAGTATATAACAGATCATTTCCTCCCTCGATCC
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GenBank top hits (Blast detail) | Score | e value |
AAM63708 submergence induced protein 2A [Arabidopsis thaliana] | 962 | 5e-102 |
XP_002863629 ATARD4 [Arabidopsis lyrata subsp. lyrata] | 960 | 9e-102 |
NP_568630 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 4 [Arabidopsis thaliana] | 955 | 3e-101 |
BAB11314 unnamed protein product [Arabidopsis thaliana] | 941 | 1e-099 |
XP_002517074 acireductone dioxygenase, putative [Ricinus communis] | 862 | 2e-090 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q8H185 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 4 | 955 | 2e-102 |
A2XCT8 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 | 701 | 4e-073 |
Q10RE5 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 2 | 701 | 4e-073 |
Q8W108 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 3 | 695 | 2e-072 |
A2Z7C4 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 | 685 | 3e-071 |
TrEMBL top hits (Blast detail) | Score | e value |
B9RTK5 Acireductone dioxygenase, putative | 862 | 1e-090 |
B9HKA3 Predicted protein | 814 | 5e-085 |
C6T2B4 Putative uncharacterized protein (Fragment) | 813 | 7e-085 |
C6T274 Putative uncharacterized protein | 811 | 1e-084 |
B9RTK2 Acireductone dioxygenase, putative | 727 | 6e-075 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT5G43850.1 ARD4; acireductone dioxygenase [iron(II)-requiring]/ metal ion binding | 956 | 1e-103 |
AT4G14710.1 acireductone dioxygenase [iron(II)-requiring]/ metal ion binding | 695 | 2e-073 |
AT4G14710.2 acireductone dioxygenase [iron(II)-requiring]/ metal ion binding | 695 | 2e-073 |
AT4G14710.3 acireductone dioxygenase [iron(II)-requiring]/ metal ion binding | 683 | 5e-072 |
AT4G14716.1 ATARD1 (ACIREDUCTONE DIOXYGENASE 1); acireductone dioxygenase [iron(II)-requiring]/ metal ion binding | 675 | 4e-071 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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