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Information for unigene UN18847

FASTA Sequence
Unigene ID: UN18847Length: 626  SNP
GGAAACCTTATCCAGAAACTAAACTTCAAATGACTGTCTGAAGGCGAAATCCTTCTGTACCAAGAAGATGTCTCTTCTCTGTTTCA
ATTCTCTCGCTCCTCTCTCTCCTCCAAGGCTTCAAGTTTCGTCTTTCGCTTCACCAGTTTTAGGCCTTAAACCCAACACCGTCGAG
ACCAAGAACAGAGTCTCTCTGAGTGCGTACAGCTTGAGCATCAGCAATGGAAGAGCAGCGATTGTGAAGGCAGCTGCTTCTTCTGG
TGTGGACGGAGCAGCTGAGCCCGAGAGCAGTGAGGAACCGCCTAAGACTGTTGACAAACTACCGTTGGAGTCAAAAGAAGCTAAAG
AGAAGCTGCTGATGGAACAGAGGATGAAGATGAAGCTGGCCAAGAAGATTAGGCTAAGGAGGAAACGTCTGGTTCGTAAGCGTAAG
TTGAGGAAGAAGGGTCGATGGCCACCTTCCAAGATGAAGAAGCTCAAGAATGTCTAGAGATGACTCTCTTCGCTCTCTCAACTTTT
ATTGTAATGTTGTTTGTAAACTTTCCGGAATTTGAAATGTAGACATTGTTTTTGGATTTAATCTCAAGCTGAGAGAGTTCTTTACT
TCTTTAAAAGGATTCATTACAAAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878118 hypothetical protein ARALYDRAFT_486132 [Arabidopsis lyrata subsp. lyrata]4651e-044
NP_191250 plastid-specific 50S ribosomal protein 5 [Arabidopsis thaliana]4533e-043
AAK68822 ribosomal protein, chloroplast [Arabidopsis thaliana]4533e-043
NP_001148929 50S ribosomal protein L40 [Zea mays]2803e-023
NP_001042743 Os01g0278900 [Oryza sativa Japonica Group]2671e-021

Swiss-Prot top hits (Blast detail)Scoree value
Q9LER7 50S ribosomal protein 5, chloroplastic4737e-047
P11891 50S ribosomal protein 5, chloroplastic2245e-018
P27684 50S ribosomal protein 5 alpha, chloroplastic1994e-015

TrEMBL top hits (Blast detail)Scoree value
B6T8T0 50S ribosomal protein L402802e-023
A2WNG6 Putative uncharacterized protein2678e-022
Q5NBK8 Os01g0278900 protein2678e-022
B4FIS3 Putative uncharacterized protein2642e-021
B6SM60 50S ribosomal protein L402642e-021

Arabidopsis top hits (Blast detail)Scoree value
AT3G56910.1 PSRP5 (PLASTID-SPECIFIC 50S RIBOSOMAL PROTEIN 5)4745e-048

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
107  64%
 
93  27%
 
191  9%

Unigene MembersMember information