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Information for unigene UN18848

FASTA Sequence
Unigene ID: UN18848Length: 1465  SNP
TTTTAGGACATCCAAACAATATTTATAAGGAAAAAAACCAAAAAATTGAAACAACGACCAAAATATAATTTGATAAATTTTTGCTT
AAGGACAAAAAAAACAGCAATCACAAGCATCCTAAAGAGAAATAGAGACACGGATAGAACTAAAGTACACAGAGACTTCTTGACAC
AGCCAAAAGGTTCTAAAGAACCATATAACAACAGATAGTTTCAATTCCCATAATCAACTAGGGAAAGAGACTCGTAAACAGACTCA
CCACCACGAAACAGAGAGCATAGCCCTTAGAAGCACTTCCTGTGAACAATGGATGGACCCGACTCGTCGTACTCTCCCTTTGAAAT
CCACATCTGTTGGAAAGTGCTGAGGGATGCAAGGATGGATCCTCCAATCCAGACACTGTATTTCCTCTCAGGAGGTGCGACCACCT
TGATCTTCATGCTGCTTGGCGCGAGTGCCGTGATCTCTTTGCTCATACGGTCAGCGATTCCTGGGAACATGGTTGAACCACCACTG
AGGACGATGTTTCCATACAGATCCTTCCTGATATCGACATCACACTTCATGATGGAGTTGTAAGTCGTTTCGTGGATTCCAGGGGC
TTCCATTCCGATGAGCGATGGCTGGAACAGTACTTCAGGGCAACGGAACCTTTCAGCTCCGATAGTGATGACTTGTCCATCAGGTA
GCTCGTAGTTCTTCTCCACTGACGAACTGCTCTTTGCGGTATCCAGCTCTTGCTCGAAGTCGAGAGCGACGTAAGCAAGCTTCTCT
TTTATGTCACGGACAATTTCTCGCTCCGCGGTTGTGGTGAACATGTAACCTCTCTCGGTGAGGATCTTCATCAGAGAATCAGTGAG
ATCACGACCAGCTAGATCGAGACGGAGGATAGCATGAGGAAGAGCATAACCCTCGTAGATTGGCACAGTGTGAGACACACCATCAC
CAGAGTCGAGTACAATACCGGTAGTACGACCACTGGCGTAGAGAGAAAGAACGGCCTGGATAGCAACATACATGGCAGGGACATTG
AATGTCTCGAACATAATCTGAGTCATCTTCTCCCTGTTGGCTTTAGGGTTAAGAGGCGCTTCAGTGAGAAGAACAGGATGCTCTTC
AGGGGCGACACGGAGCTCGTTGTAGAAAGTGTGATGCCAGATCTTCTCCATGTCATCCCAGTTGCTCACAATACCATGCTCGATCG
GATACTTCAAAGTGAGAATACCTCTTTTGGACTGAGCTTCGTCACCAACGTAAGCATCTTTCTGACCCATCCCAACCATGACACCA
GTGTGCCTGGGACGACCAACAATACTTGGGAAAACAGCCCTGGGAGCATCGTCACCAGCAAAACCAGCCTTCACCATTCCAGTTCC
ATTGTCACAGACAAGGGGTTGAATGTCCTCACCATCAGCCATCTTTCACTAGCGAGGAAGAAGAAGATAACTCAGAGAAGACGATT
CGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34498 unnamed protein product [Thellungiella halophila]19531e-216
NP_196543 actin 7 [Arabidopsis thaliana]19477e-216
AAD03741 actin [Brassica napus]19423e-215
AAW63030 actin [Isatis tinctoria]19388e-215
BAK57343 actin1 [Morella rubra]19388e-215

Swiss-Prot top hits (Blast detail)Scoree value
P53492 Actin-719473e-217
A2XNS1 Actin-319222e-214
Q10AZ4 Actin-319222e-214
P0C539 Actin-219081e-212
A3C6D7 Actin-219081e-212

TrEMBL top hits (Blast detail)Scoree value
Q9ZSD7 Actin19422e-215
Q5FZP3 Actin19386e-215
Q9XHH1 Actin19377e-215
B8Y645 Actin19369e-215
Q7XZJ2 Actin19369e-215

Arabidopsis top hits (Blast detail)Scoree value
AT5G09810.1 ACT7 (ACTIN 7); structural constituent of cytoskeleton19482e-218
AT2G37620.1 ACT1 (ACTIN 1); structural constituent of cytoskeleton18953e-212
AT2G37620.2 ACT1 (ACTIN 1); structural constituent of cytoskeleton18953e-212
AT3G53750.1 ACT3 (actin 3); structural constituent of cytoskeleton18953e-212
AT3G12110.1 ACT11 (actin-11); structural constituent of cytoskeleton18926e-212

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
74  24%
 
215  29%
 
195  29%
 
181  6%
 
202  12%

Unigene MembersMember information