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Information for unigene UN18871

FASTA Sequence
Unigene ID: UN18871Length: 703 SSR 
GTGTAGTAAATTATTCGATTATTTGAAACAATGTATGTTGAACAGAGGGATAGAGATAGAGACTTGACTCATTAAAATCAACCATG
ACAAAAACTAGTCCTTTTTTTTTTTTTGAACAACTAAGAGTTATGGTTCTTCATCATGTCATCATGGTTTACTAATCAATCACTTT
GGTCCTCAGAATCTTCACTTCATGTATTGGCCTGTCGGTGTTATCCGTTTGAACACTACCGAGCCTCTTGATCACCTCCATACCAC
GGCAAACTCTGCCAAATATAGTATGCTTTCCATCCAAGGAGGGAGCAGGTGCTAAAGTGATGAAGAACTGACTCCCATTAGTGTTA
GGACCAGCGTTTGCCATTGACAAAATCCCAGCTCCTGTGTGCTTCAACTCTGCCTTTATCTCGTCCTCAAACTTGGAACCATAAAT
AGACTGGCCACCTCTTCCAGTTCCAGTAGGATCACCACCTTGCACTATGAAATCCTTGATGATTCTGTGGAAGAGAACGTTGTCAT
AGTAACCTCTTCGTGATAGCTCCACGAAGTTCCGGCACGTTCTCGGTGAGTGTTTGTAATACATCTCGACGGTGAAAGGACCCATG
GAGGTCTCTAGTGTAACCTCCGGCGGACTTCCTTCAGGTCTCGCCGTCATGTTTCGGGGAGAGAGAGAGAGGGGAACCGAAACGCT
TTACTATTACCGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_181157 peptidyl-prolyl cis-trans isomerase-like 1 [Arabidopsis thaliana]8397e-088
AAM61561 cyclophilin-like protein [Arabidopsis thaliana]8307e-087
ABK78697 peptidyl-prolyl cis-trans isomerase [Brassica rapa]7724e-080
XP_002322812 predicted protein [Populus trichocarpa]7724e-080
ACU20458 unknown [Glycine max]7715e-080

Swiss-Prot top hits (Blast detail)Scoree value
Q5ASQ0 Peptidyl-prolyl cis-trans isomerase-like 16162e-063
Q2U6U0 Peptidyl-prolyl cis-trans isomerase-like 16046e-062
Q4WCR3 Peptidyl-prolyl cis-trans isomerase-like 16002e-061
Q7SF72 Peptidyl-prolyl cis-trans isomerase-like 15983e-061
Q8X191 Peptidyl-prolyl cis-trans isomerase-like 15841e-059

TrEMBL top hits (Blast detail)Scoree value
Q9SIH1 Peptidyl-prolyl cis-trans isomerase8395e-088
Q8LF78 Peptidyl-prolyl cis-trans isomerase8305e-087
A0T2Q0 Peptidyl-prolyl cis-trans isomerase (Fragment)7723e-080
B9IIR7 Peptidyl-prolyl cis-trans isomerase7723e-080
C6TF56 Peptidyl-prolyl cis-trans isomerase7714e-080

Arabidopsis top hits (Blast detail)Scoree value
AT2G36130.1 peptidyl-prolyl cis-trans isomerase, putative / cyclophilin, putative / rotamase, putative8402e-090
AT3G44600.1 CYP71 (CYCLOPHILIN71); chromatin binding / histone binding / peptidyl-prolyl cis-trans isomerase4371e-043
AT1G01940.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein4235e-042
AT5G67530.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein4163e-041
AT4G33060.1 peptidyl-prolyl cis-trans isomerase cyclophilin-type family protein3788e-037

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
85  100%

Unigene MembersMember information