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Information for unigene UN18873
| FASTA Sequence |
| Unigene ID: UN18873 | Length: 1546 |
| SNP | GGGCCAAAGAGGGAATCGAGAGGAGAGACTACGATTCACTTACGAGAAGATTTCTCACAGGGAAAGAAGCTATGGACTTGGCTCTT
CATTTTCCTTCGTTGATCAAACAAGGATTCACCAGAGCCAATCATCTTCCTGTTCGAGATTCTCTTTCAACAAGCTTTGGGCAGAG
TTTTTCGAGAACAGCGTTTGATGGTGATAGAAGAAGCTGGCCTGGAGAGAAGGCTTGGTGGTCTTCCTCCCTAACTAGGAGATCCA
AGAAAGGATCTGTTGTTTGTTGCAAGAATCCGTCTGATGAACAGAGCTCAGACTCGAGTAAATCGAAGCAAGAGGAGATCATTGCT
CTCTTAAGTCGGATTCAAGCTTCAATCTCCAAAGGAGAGTCTCAGGGAGCTGATGAGAAGAACAGCAATGACTCTTGTGGGAATGG
GTCGCTGAGTAAAGCTATTCTTGACGTTCTTGAGAAACCAAGAGAGAAAACTGAAGGAGATGCTGGTCTAAGGAAAGAGCCACCTA
AGAGACAAGTAGCTCGGCCACCGTTTAGTTTTGCCAAGAGAGCTCCTACTAGACCATCTGCTTCAGATCCAAGAGAGCTCAAAGAA
GTTGCAAAGAACAGAGGACTCAAAGGATACTCAAAGCTAAAGAAGAGTGAGATTCTGGAGCTACTCAGATCCTCCTAATTTTAATG
TTCAGTCCACATTCTCTCTGCTATGTAAATTAGAAACACAGATATGGCTTGGACTTGTTTTTAAAATAGATAAAGAGTTTAAAATT
GAAAACGATAACCTCCAAAAATTGTTCATATCTCGAGAGTACTTAAGGATTCTACCACAACAAGAAAGACTTATCATCCAGAATCG
CAAATTATAACAACTTGAAACAGAGCCAAAACACCACAAAACAAAATGAAACTCTTCAACCGGTGATGTTCTGAGACTTGTTGAGG
ATAACACCTTCATACTTAACTTGGAACCACTTCATGGCATCATCCTTTGTAACCCTATGTTGAATCCCAACGCGAGTCTTGCACCT
ACGGCGACGTGCAACACGGTATCCAGGACGCTCAAGAACAACGTAGAAGTCCATTCCATAGATACCCGTAGAAGGATCGTACTTGA
TACCAAGATCAATGTGCTCCTGGATACCGAATCCAAAACAGCCAGTGTCACTGAAGTTCCTCCTCAACAGCTCGTACTCCTTCACT
TTCAAACCACTCTCAAGAAGCTGCATTGCCTTGTCTCCTCTCACGGTGACGTAGCACGCAATCTTTTCGTTACGCCTAATACCGAA
TGACCTCACAGTGTACCTCGCCTTGGAGAAAACAGGAGTTTGACCACTGAGCTGTTCCAACACCTTGGAGGCACGGGTGAGACGAT
CACCACTCTCACCAACAGAGATGTTAAGGACGAGCTTCTGAACCTTGATATCCCTCATTGGGTTCGAGAGCTTCTTCTCTGACGCC
ATCTCAGGATTCAGGGATGCGAGAAAAACGAGGGAGCTGATCAGCAAAGAGAGTGGCAGAGTAATAACGGCCGGTTGCGAGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_191429 60S ribosomal protein L11-2 [Arabidopsis thaliana] | 932 | 4e-098 |
| CAA57394 ribosomal protein L16 [Arabidopsis thaliana] | 928 | 1e-097 |
| NP_850376 60S ribosomal protein L11-1 [Arabidopsis thaliana] | 927 | 1e-097 |
| T04865 ribosomal protein L11, cytosolic - Arabidopsis thaliana | 927 | 1e-097 |
| CAA57395 ribosomal protein L16 [Arabidopsis thaliana] | 924 | 3e-097 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P42794 60S ribosomal protein L11-2 | 932 | 2e-099 |
| P42795 60S ribosomal protein L11-1 | 927 | 6e-099 |
| P46287 60S ribosomal protein L11 | 897 | 2e-095 |
| A2YDY2 60S ribosomal protein L11 | 874 | 9e-093 |
| Q0DK10 60S ribosomal protein L11 | 874 | 9e-093 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WQZ1 60S ribosomal protein L11B | 927 | 1e-097 |
| Q676Z7 60S ribosomal protein L11 (Fragment) | 910 | 9e-096 |
| B9R7U8 60S ribosomal protein L11, putative | 907 | 2e-095 |
| Q8GTE2 Ribosomal protein RL5 | 901 | 1e-094 |
| A9PBE6 Predicted protein | 897 | 3e-094 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G58700.1 60S ribosomal protein L11 (RPL11B) | 933 | 1e-100 |
| AT4G18730.1 RPL16B; structural constituent of ribosome | 933 | 1e-100 |
| AT5G45775.2 60S ribosomal protein L11 (RPL11D) | 933 | 1e-100 |
| AT2G42740.1 RPL16A; structural constituent of ribosome | 928 | 4e-100 |
| AT5G45775.1 60S ribosomal protein L11 (RPL11D) | 884 | 5e-095 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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