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Information for unigene UN18903

FASTA Sequence
Unigene ID: UN18903Length: 1811  SNP
GGACCACCACAACCATCGGAGACACCACCGAAAAAAAACAAAACACAAAACCCCTTAAAAAAAGTTTTAGTTTCTTCTTTTTCTAC
TTAATGGAGAAAGCTTCCAACGGTTCCTCCGCGTTGGAGATGCATACGTCTGAGCTTGATCAGCCGGCGGCTCTCCGCAAGATCAT
ATCGGTTTCCTCCATTGCCGCCGGTGTACAGTTCGGTTGGGCTTTACAGCTATCTCTCCTGACTCCTTACGTGCAGCTACTCGGAA
TCCCACATAAATGGGCCTCTCTCATCTGGCTCTGCGGCCCAATCTCCGGTATGCTTGTTCAGCCCATCGTCGGTTACCACAGTGAC
CGTTGCACCTCAAGATTCGGCCGCCGTCGTCCTTTCATCGTCGCCGGAGCCGGTCTAGTCACCGTCGCCGTGTTCCTTATCGGTTA
CGCCGCCGATATAGGTCACAGCATGGGTGATCAGCTCGACAAACCGCCGAGAACGCGAGCTATCGCGATTTTCGCCCTCGGGTTCT
GGATTCTCGACGTGGCGAACAACACTCTCCAAGGACCATGCCGTGCATTCTTGGCTGACCTGTCCGCGGGAAACGCGAAGAAAACG
CGGACCGCAAACGCGTTTTTCTCGTTCTTCATGGCGGTGGGAAACGTTTTGGGTTACGCGGCTGGCTCTTACAAGAACCTCTACAA
AGTTGTCCCATTCACGATGACCAAGTCTTGCGATCTCTACTGCGCGAACCTCAAAACGTGTTTTTTCATCTCCATAACGCTTCTCC
TCTTGGTCACGTTCATGTCTCTATGTTACGTGACCGAGAAGCCATGGACCCCTGAGCCAACCGCAGACGGGAAAGGCTCGAGCGTT
CCTTTCTTCGGAGAGATCTTCGGAGCTTTCAAAGAGCTGAAAAGACCGATGTGGATGCTTCTTATAGTCACTGCACTGAACTGGAT
CGCTTGGTTCCCTTTCCTCCTCTTCGACACTGACTGGATGGGCCGTGAGGTGTACGGAGGAAACTCAGACGCAACCGCAAGTACCG
CCTCTAAAAAGCTTTACAACGACGGAGTTAGAGCTGGCGCGTTGGGGCTTATGCTTAACGCGATTGTTCTTGGGTTCATGTCTCTT
GGTGTTGAATGGGTCGGTAGGAAAATGGGTGGAGCTAAACGGCTTTGGGGAGCTGTTAACTTCATCCTTGCTATTTGCTTGGCCAT
GACTGTTGTGGTGACTAAACAGGCGGAGGATCACCGGCGAGATCACGGTGGTGCTAAAACAGGACCGCCTGGTAGTGTCACCGCTG
GTGCTTTAACTCTCTTTGCTGTTCTCGGTATTCCCCAAGCGATTACGTTCAGTATTCCTTTTGCGCTAGCTTCCATATTTTCAACC
AATTCTGGTGCCGGCCAAGGGCTGTCCCTAGGTGTTCTGAATCTGGCTATTGTTGTCCCACAGATGGTGGTATCAGTGGGTGGTGG
ACCATTCGATGAACTATTCCATGGTGGAAACATTCCGGCGTTTGTGCTAGGAGCAATTGCGGCCGCAGTGAGTGGCATATTGGCTT
TAACGGTGTTGCCTTCGCCGCCACCGGATGCTCCAGCTTTCAAGACTGGGGCTATGGGATTTCATTAAGTTTTAGCAGTGTTTGAG
TGGCTATGTAACTCTCATAAAACAGTAGTGTTATTGTGCAAATCCTACATAAAGAGAAAAAGGAAATTAATCTCCTTGGGTTGCTG
GTTTGTATTGTACCTAAACCCATTATGTTCCTTTTTTGTAACTGAAATTTTCAATTTGGAGTATAATTCACCGTTTGCCACCTTCA
AGGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAL58072 sucrose transporter SUC2 [Brassica oleracea]26021e-291
ACB47398 sucrose transporter [Brassica napus]25383e-284
NP_173685 sucrose transport protein SUC2 [Arabidopsis thaliana]25007e-280
CAA53150 sucrose-proton symporter [Arabidopsis thaliana]24962e-279
AAM10322 At1g22710/T22J18_12 [Arabidopsis thaliana]24953e-279

Swiss-Prot top hits (Blast detail)Scoree value
Q39231 Sucrose transport protein SUC225003e-281
Q39232 Sucrose transport protein SUC120083e-224
Q9C8X2 Sucrose transport protein SUC519457e-217
Q9ZVK6 Sucrose transport protein SUC818902e-210
Q6A329 Putative sucrose transport protein SUC618784e-209

TrEMBL top hits (Blast detail)Scoree value
Q8VYX3 Sucrose transporter SUC226027e-292
B2D1N4 Sucrose transporter25382e-284
Q8VYX4 Sucrose transporter SUC120472e-227
Q058N2 At1g6657018572e-205
D1GC38 Sucrose transporter 117748e-196

Arabidopsis top hits (Blast detail)Scoree value
AT1G22710.1 SUC2 (SUCROSE-PROTON SYMPORTER 2); carbohydrate transmembrane transporter/ sucrose transmembrane transporter/ sucrose:hydrogen symporter/ sugar:hydrogen symporter25083e-283
AT1G71880.1 SUC1 (Sucrose-proton symporter 1); carbohydrate transmembrane transporter/ sucrose:hydrogen symporter/ sugar:hydrogen symporter20138e-226
AT1G71890.1 SUC5; carbohydrate transmembrane transporter/ sucrose:hydrogen symporter/ sugar:hydrogen symporter19537e-219
AT2G14670.1 ATSUC8 (Sucrose-proton symporter 8); carbohydrate transmembrane transporter/ sucrose:hydrogen symporter/ sugar:hydrogen symporter18901e-211
AT5G43610.1 ATSUC6 (Sucrose-proton symporter 6); carbohydrate transmembrane transporter/ sucrose:hydrogen symporter/ sugar:hydrogen symporter18783e-210

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
106  43%
 
214  29%
 
83  21%
 
201  7%

Unigene MembersMember information