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Information for unigene UN18905
| FASTA Sequence |
| Unigene ID: UN18905 | Length: 1165 |
SSR | | GGGTCTCTCACTTGCTCATCCCTCCCTCCTCTCCCACACATCGAAGAACTCAGAGAGAGAGAGATATGGAGCTCGATTCCATCACC
GCTAGGCGCAGACTCGCCACCGTCGCCGCTCACTTCCCGTTACCCACCACCAACGATCCCGTCTCCTCCCCATCGCTCGTCCCTTT
GAACTGTAGCGGTAGTTTGAACTCTGCCATCATCAGAAGATGTGACAACAAGATCTCTTTTGCTCGGCAAGCATCTTCTGAACAGG
GCTTTTTCATGAGGCAGGCTCCCACTGACCAGCAGGACTAGCGGCGGTGGCATCACTTTGAAGAACTCTGTCATTAGAAGAGGTGA
CAACAGGCTGTATTTTGCTCGGCAAGCATCTTCTGCACAGGGTCTTTTCATGAGGCAGGCTTCAACTGATGATATGAACGCTGCAT
CTACCAAGTGCTCTGCCACCAAAACGAATGGCTTGTCTTCTTCACAACAACCATTGCTTTCCAGACCTGAGTACGCCCCACCACAG
TTTTCCAAAGCTGCCGCAAAAGATGAGTTCTTTGTTTCTTTTGATTCACCATGTCAGCAAAAGGAAGACTTGGAAAAGCCATACAC
GCCTGACCTTCCCAAGTTAGCCAATCTAGGGACTGTTTGGTCTCCGAGATCGAATGTTGAAGAGTATGAACATAACTATGTTGTGG
CTGTAGAGCTACCAGGGGCTAGTATCAATGATATAAGAGTTGAGGTCGACAACCTAAACTTGACTGTGACAGGTAGACGCACAGCT
GTCTGTCAAAAAGTTGGTGGATGCACCAAAGGTTCAATGTATCATCACAAGCAAGAAATACTACAAGGACCATTCAATGTTTCCTG
GCCACTCCCTAGCAATGTGAACAAGGATAACGTTGCTGCTGAATTTATGGATGGGATTCTGAGAATAGTGATTCCAAAGCTCTAAG
GGTTAATCGTTCTGGAACCATATACAAAACAGTAAATAATGTTGTATAATATATGGTGTTTGTGTGGAAGAAGAGAAAGAAAAGCA
ATAATTGGTGAAAGATATGTAAAATAGTTTGGTCTTTATTTATCATAGATTGCAGACAGGCATGCTCAGTTGATAGAGTAAGCCAT
GTAAACAATCCATTAATATAAGAATAAAATAAAGCTTGATTACAACT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABV89635 peroxisomal small heat shock protein ACD31.2 [Brassica rapa] | 879 | 4e-092 |
| BAJ33960 unnamed protein product [Thellungiella halophila] | 800 | 5e-083 |
| XP_002892343 predicted protein [Arabidopsis lyrata subsp. lyrata] | 722 | 6e-074 |
| NP_172134 alpha-crystallin domain 32.1 [Arabidopsis thaliana] | 714 | 5e-073 |
| AAM63342 heat shock protein, putative [Arabidopsis thaliana] | 714 | 5e-073 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q4UJB1 Small heat shock protein C4 | 169 | 3e-011 |
| Q4UKR8 Small heat shock protein C2 | 160 | 4e-010 |
| O14368 Heat shock protein 16 | 124 | 6e-006 |
| O30851 Heat shock protein HSP.16.4 | 122 | 1e-005 |
| O81822 17.7 kDa class II heat shock protein | 122 | 1e-005 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A8IXM7 Peroxisomal small heat shock protein ACD31.2 | 879 | 3e-092 |
| A7VJH1 26-kD peroxisomal membrane protein | 714 | 3e-073 |
| Q208N7 At1g06460 | 714 | 3e-073 |
| Q8LD91 Heat shock protein, putative | 714 | 3e-073 |
| Q9SHJ1 F12K11.19 | 661 | 5e-067 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G06460.1 ACD32.1 (ALPHA-CRYSTALLIN DOMAIN 32.1) | 715 | 1e-075 |
| AT5G12030.1 AT-HSP17.6A (ARABIDOPSIS THALIANA HEAT SHOCK PROTEIN 17.6A); unfolded protein binding | 122 | 8e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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