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Information for unigene UN18910

FASTA Sequence
Unigene ID: UN18910Length: 787 SSR 
CAACTCCATAGAAGAACCGAAACAAAATCTCGTTACCGTCTCTCCAAGCAAGCAAGCAAGCAAGAAGAAGAGGCCTCCCAGTTCCC
ACCGCAACCAAAGATGCTCGCAGTAAGCGTGAAGTGGCAGAAGAAGTTGTTTGAAGGGATCGAGATTGATCCCACTCTGCCTCCCT
ATGTGTTCAAGGCTCAGCTGTATGATTTGACTGGAGTTCCTCCAGAGAGGCAAAAGATCATGGTCAAAGGTGGCCTCTTGAAGGAT
GGTGCAGATTGGTCCGCCATTGGAGTGAAAGATGGTCAGAAGCTGATGATGATGGGAACTGCAGATGAGATTGTGAAAGCTCCTGA
AAAGGCTATTGTTTTTGCTGAGGATCTACCTGAAGAGGAGCAAGCCACTCATTTGGGTTACAGTGCAGGCCTTGTCAACCTTGGAA
ACACATGTTACATGAACTCCACGGTGCAGTGCTTAAAATCAGTCCCAGAGTTGAAATCTGCGTTATCCAACTACGCACTTACTGGA
CGAAGCAATGATGTCGACCAGACTTCTCACATGCTCACAGTTGCCACACGCGAGCTGTTTGGTGATCTTGACAGAAGTGTCAATGC
TGTTTCCCCTACGCAGTTCTGGATGACATTACGAAAAAAGTTCCCTCAGTTTAGTCAGTTGCAGAATGGAATGCACATGCAGCAGA
TGCTGAAGAATGTTGGACACAACTGTTGTACACTCTTTCACAGTCCTAAAGCACAACTTCCAGCGAGGATTCTGATGCAGTGAAGC
TCTCTTTGGTGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002894329 ubiquitin-specific protease 6 [Arabidopsis lyrata subsp. lyrata]9194e-097
AAG42751 ubiquitin-specific protease 6 [Arabidopsis thaliana]9161e-096
NP_564596 ubiquitin carboxyl-terminal hydrolase 6 [Arabidopsis thaliana]9161e-096
XP_002885433 ubiquitin carboxyl-terminal hydrolase 7 [Arabidopsis lyrata subsp. lyrata]8121e-084
NP_566680 ubiquitin-specific protease 7 [Arabidopsis thaliana]8083e-084

Swiss-Prot top hits (Blast detail)Scoree value
Q949Y0 Ubiquitin carboxyl-terminal hydrolase 69165e-098
Q84WC6 Ubiquitin carboxyl-terminal hydrolase 78082e-085
P54578 Ubiquitin carboxyl-terminal hydrolase 144712e-046
P60051 Ubiquitin carboxyl-terminal hydrolase 144712e-046
Q9JMA1 Ubiquitin carboxyl-terminal hydrolase 144702e-046

TrEMBL top hits (Blast detail)Scoree value
B9MWQ3 Ubiquitin carboxyl-terminal hydrolase7742e-080
B9T7A3 Ubiquitin carboxyl-terminal hydrolase7723e-080
A9NUT3 Ubiquitin carboxyl-terminal hydrolase7527e-078
B6T6V5 Ubiquitin carboxyl-terminal hydrolase7455e-077
C5XN14 Ubiquitin carboxyl-terminal hydrolase7411e-076

Arabidopsis top hits (Blast detail)Scoree value
AT1G51710.1 UBP6 (UBIQUITIN-SPECIFIC PROTEASE 6); calmodulin binding / ubiquitin-specific protease9164e-099
AT3G21280.1 UBP7 (UBIQUITIN-SPECIFIC PROTEASE 7); ubiquitin thiolesterase/ ubiquitin-specific protease8081e-086
AT1G51710.2 UBP6 (UBIQUITIN-SPECIFIC PROTEASE 6); calmodulin binding / ubiquitin-specific protease6899e-073
AT4G10570.1 UBP9 (UBIQUITIN-SPECIFIC PROTEASE 9); cysteine-type endopeptidase/ ubiquitin thiolesterase1243e-007
AT4G10590.2 ubiquitin carboxyl-terminal hydrolase family protein1216e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  50%
 
121  50%

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