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Information for unigene UN18918

FASTA Sequence
Unigene ID: UN18918Length: 623  SNP
GTCCATCTATATCCTCTCATCCTTATCCAAATCCCTAAACTTTCAAGATTATTATGGCGACCTCACGACTGGCGAGATTTATAACC
GAGGTTGCGCCACCGCAAGTTGTCACGGTGATGCGGCGAAGAACGGCGAAAGTGCTCGACACGATCAAGGAGGAAGAAAGAGAGGT
TGGGACTGATCATTCCATGTTTTCATCTTCTCTGACTTCCAAAGTCTCACCGTTTACTTCTCCTTGTTCTGCTTCTTCCTCCTCTG
CTTCATTCAGTTCTGGTCGGACATATTTCCCGGTTACAGAGAACCGGAGCTCTTTTCCGGTTTTCAAAAACTGAAACCAACTTCAC
CGTCTCCTGCCGAAATAATTGTTTTCAGATGTAGTTATGTACATGTTTGCGTTGTTACGGGTAGTATGTGTGTGCGTAAATCTTGA
TGTGCCGATGAGCTCCGGCGATTCGGTCGATCAAAACCGGATCAGCATCGGGAAGCCTAAACCGGGTTGACTCTAATGTATGTATA
TCAGTCAGTATTTGGAAGGGACTATGTTCGTTTTTAGTGTATTTTTGAATGAAATGAGCCCAAAATCAATAATTTTTGTAATCTAT
CAATACTATTAAAACATTGGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564352 uncharacterized protein [Arabidopsis thaliana]3262e-028
XP_002890861 hypothetical protein ARALYDRAFT_890567 [Arabidopsis lyrata subsp. lyrata]3224e-028
XP_002519637 conserved hypothetical protein [Ricinus communis]1925e-013
XP_002305342 predicted protein [Populus trichocarpa]1649e-010
XP_002525962 hypothetical protein RCOM_0596970 [Ricinus communis]1576e-009

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9C754 At1g30260/F12P21_93261e-028
B9S0W8 Putative uncharacterized protein1924e-013
B9H412 Predicted protein1647e-010
B9SIZ3 Putative uncharacterized protein1574e-009
B9HZP8 Predicted protein1557e-009

Arabidopsis top hits (Blast detail)Scoree value
AT1G30260.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to cytokinin stimulus; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: galactosyltransferase family protein (TAIR:AT4G21060.1); Has 16 Blast hits to 16 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).3276e-031
AT4G21060.1 galactosyltransferase family protein1341e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  29%
 
112  29%
 
81  14%
 
92  29%

Unigene MembersMember information