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Information for unigene UN18919

FASTA Sequence
Unigene ID: UN18919Length: 1305 SSR 
CTACTTTGTTGTCGCTCCGTTAATGGCGACGGGTACGCAAGGGCAGCAGCAGCAGCAGCAGCAGACGGCGATTGACTCGTCGGTTC
TGGATGATATAATCAGACGCCTCACGGAGGTTCGGTTAGCTAGACCAGAGAAGCAAGTCCAGCTCTCCGAAGCCGAGATCAAACAG
CTCTGCACTACCGCTAGAGACATCTTCCTTCACCAACCCAATTTGCTTGAGCTCGAGGCGCCCATCAAAATCTGCGGGGACATACA
TGGGCAATACAGTGATTTGCTGAGGCTGTTTGAGTACGGTGGCTTCCCTCCTAGTTCCAACTATCTCTTCCTAGGAGACTACGTGG
ACCGTGGCAAACAGAGTCTTGAAACCATTTGTCTCTTGCTAGCTTACAAGATCAAATACCCAGGCAACTTTTTCTTGCTCAGAGGA
AACCACGAGTGTGCTTCTATCAACCGGATATACGGGTTTTACGATGAGTGCAAAAGGAGGTTTAACGTGAGGGTGTGGAAGGTTTT
CACAGACTGTTTCAATTGCCTTCCCGTTGCGGCGCTTATAGATGACAAGATACTGTGTATGCACGGTGGACTCTCTCCTGAGCTCA
ACCATTTGGATGAGATTAGAAGCTTGCCTCGTCCGACTATGATTCCGGACACTGGTCTGCTCTGTGATTTGCTCTGGTCTGATCCT
GGGAAAGATGTTAAAGGATGGGGGATGAATGATAGAGGCGTTTCGTACACGTTTGGTCCTGACAAAGTCTCTGAGTTTCTAGAGAA
ACATGATTTGGATCTTGTATGCCGTGCTCATCAGGTTGTGGAGATGGTTATGAGTTCTTTGCGGATAGACAGCTGGTGACGGTGTT
CTCAGCTCCTAACTACTGTGGGGAGTTTGATAATGCTGGTGCGATGATGAGCGTGGATGAGAACCTTATGTGTTCGTTTCAGGTTT
TGAAGCCTGCGGAGAAGAAGTCTAAATTCATGATGTCTACAAAGATTTGATCCCTTTGATTTGAGATGGGTGTGGTTTTTGATCAG
AGAATTTGATTCAAAACGTTGCAAGATTTGGCTTTGAAGTGTGTGCTTATGGTAGTGAGTGACTAGTGATAACTCTTGGAAAGGGG
GGCAAAACCATAGTCTTCTCTACTTCCCAACTTCACTTTTTTCTGCAATTTTTTTGTTTCTATCTTCTTTTGTAAGGGGTTTACAT
TTGCCTGTTGAAAGCACATAATTGGTGTGTACATGCATATGATTCTCTCTTGGATCCTAAAACACCAATGAAATGATGATTATAAA
AGAAGAGTTTGGTTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34276 unnamed protein product [Thellungiella halophila]13284e-144
NP_181514 serine/threonine-protein phosphatase PP1 isozyme 4 [Arabidopsis thaliana]13258e-144
XP_002879825 hypothetical protein ARALYDRAFT_483018 [Arabidopsis lyrata subsp. lyrata]13194e-143
ACU22724 unknown [Glycine max]12362e-133
ACU18903 unknown [Glycine max]12334e-133

Swiss-Prot top hits (Blast detail)Scoree value
P48484 Serine/threonine-protein phosphatase PP1 isozyme 413254e-145
P48489 Serine/threonine-protein phosphatase PP112295e-134
O04857 Serine/threonine-protein phosphatase PP1 isozyme 211623e-126
O04856 Serine/threonine-protein phosphatase PP1 isozyme 111614e-126
O04858 Serine/threonine-protein phosphatase PP1 isozyme 311391e-123

TrEMBL top hits (Blast detail)Scoree value
C6TII4 Serine/threonine-protein phosphatase12361e-133
C6TAQ1 Serine/threonine-protein phosphatase12333e-133
Q10NJ4 Serine/threonine-protein phosphatase12298e-133
Q9MB26 Serine/threonine-protein phosphatase12281e-132
B9HT52 Serine/threonine-protein phosphatase12234e-132

Arabidopsis top hits (Blast detail)Scoree value
AT2G39840.1 TOPP4; protein serine/threonine phosphatase13253e-146
AT2G29400.1 TOPP1 (TYPE ONE PROTEIN PHOSPHATASE 1); protein serine/threonine phosphatase11344e-124
AT5G59160.1 TOPP2; protein serine/threonine phosphatase11301e-123
AT5G59160.2 TOPP2; protein serine/threonine phosphatase11301e-123
AT5G59160.3 TOPP2; protein serine/threonine phosphatase11301e-123

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  20%
 
122  40%
 
92  40%

Unigene MembersMember information