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Information for unigene UN18923
| FASTA Sequence |
| Unigene ID: UN18923 | Length: 1359 |
SSR | | GTAAGTAAAGTTGTTCTTTAAATTAAACGTAAATGCTGCAACAGCGTACTGCTTATAAATTACAAAACTTTGGAAAACTAGAGAGA
AAGAGAAGAGGATATAGAAAGAGACAGCAGACATGCATCTTTCTGATTCTCTCTGCCTACTACTACTACTACTCCCAGTGAAACGG
GAACGTCTGTGGAAGAGCCACAGCCTCATTACCAGATCCATCAGAGACTGCACTCGCGTTCTCAAACAATCCGGACCCATAAAAAC
CCGTCTCTTGGGACAAAGAAAGTGGTGGCTGAAGCAAATGAGAGGAAGATGATGACAGAAGAGAGAGAGCGCAATCAGAGTCATGG
ATGCAACTCGTCATTCTCGAGCAGTCTTCTTCTTCTTGCAAGAAAGGAAACTGTTTCCCTCTGTTGTTTGGAGAAGAAGATATTGG
GAACGTAATGCCTGTCTTTGCGGGACAAGAACCAGCATAGCTCTGGTTCTGCCCGTAACTTGAACCGTTCGCCATTGCTACGCTTA
CAAGACCGTTTCCCCAGCTCGGACTCGCAACAGATTTTGTAGTTGGAAACACATGTGGAGAGCTAGAAAAATCCAGCAATTTGCTA
CCTTGGAAGAAAGTTGCAGAACGACCGATATGGTCGGGCTGGGGCTTCCGTCTTCTTCTGTTGTGTCCATCAAGACGTTTCCTACA
ACTTTTCTTTTCTTCATCAAACTCTTCCAAAGCATGAAACCTGCTGCATTGTTGACAAAACCTCTGTTTATGGCCATTGATTGTAA
CCACAGGAGTTTTTGAATGTACATCACAGACCTTATGTCTTTTATGATACTCTCTACAGTTACTAAAATCAGAATCACATCCATCA
ACCAGACAAACCGGGATCTGGTTGTTCCCTCTTGTCCTCTTGGACGAACCAGAGGAGCTTCTTGAAGCCTCTGGTGCGCTCTCTTT
CAACTTACCAAGACTTATCACTTGCTCTGTGTTACCAAAAGCAGAGGAGTGTCCGATGTTTCTTCCAAGTTTCAGATCAAATGAGA
AATCTCCTTTTGGTGGTGAGGATGACCCACCAAACGAGATCGATGCATGGACTGGGGTTATATCCGGTACAGATTCTTGGTCGAAC
TCGGAGAAATAACCGGAGCTGGGTTTGAAGTTCCAATCCATTTAAAGCTTCTTCTTCTTCTTCTTCTTCACTCACAAATCCATACA
CCTACCAGTGGTCAGTAGAAGAAACTTAAAAAGAGAAGAATGACATATGCAAAAAAAAATTGACAAGTGAGAAAGAGAACGGATGG
GTTTAGTGATAGAAAGTGGAGACAACAAGAGTGGCTGCTGCTGCAATAATGCAATAAGAGAGAGCGAAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_568731 squamosa promoter-binding-like protein 13 [Arabidopsis thaliana] | 1326 | 7e-144 |
| AAM61173 unknown [Arabidopsis thaliana] | 1230 | 9e-133 |
| XP_002865818 hypothetical protein ARALYDRAFT_918095 [Arabidopsis lyrata subsp. lyrata] | 1137 | 6e-122 |
| XP_002318746 hypothetical protein POPTRDRAFT_570289 [Populus trichocarpa] | 567 | 7e-056 |
| XP_002280160 PREDICTED: hypothetical protein [Vitis vinifera] | 564 | 2e-055 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LFW6 Squamosa promoter-binding-like protein 13 | 1326 | 3e-145 |
| Q0J0K1 Squamosa promoter-binding-like protein 18 | 397 | 2e-037 |
| Q0JGI1 Squamosa promoter-binding-like protein 2 | 397 | 2e-037 |
| Q6YZE8 Squamosa promoter-binding-like protein 16 | 386 | 3e-036 |
| Q2R3Y1 Putative squamosa promoter-binding-like protein 19 | 376 | 4e-035 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DI20 AT5G50570 protein | 1326 | 5e-144 |
| B9I3U3 Putative uncharacterized protein | 567 | 5e-056 |
| A5BME3 Putative uncharacterized protein | 564 | 1e-055 |
| B9RAD2 Squamosa promoter-binding protein, putative | 554 | 2e-054 |
| B8Y9B2 Squamosa promoter-binding protein | 550 | 4e-054 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G50570.1 squamosa promoter-binding protein, putative | 1327 | 2e-146 |
| AT5G50670.1 squamosa promoter-binding protein, putative | 1327 | 2e-146 |
| AT5G50570.2 squamosa promoter-binding protein, putative | 1327 | 2e-146 |
| AT1G27370.1 squamosa promoter-binding protein-like 10 (SPL10) | 335 | 2e-031 |
| AT1G27370.2 squamosa promoter-binding protein-like 10 (SPL10) | 335 | 2e-031 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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