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Information for unigene UN18929
| FASTA Sequence |
| Unigene ID: UN18929 | Length: 1218 |
SSR | | GGGAAGAAGAAGAGAAACGATCGGGAGAGAAAGAGAGAGAGAGAGAGAGATAAGTCATCTATCCATCTGATTCCCTTCGATCTACT
AAGAGATTTCGCTGGGTGAAAAGAAGGAAGGAAGGAGATAGATCTTCTTTGTCTGCCTCATCATCATCATCGTTATCGCCAGGAGA
AAGTTAAAAAAAAACGTGTCTAAAGGGAGGAGTGGAGTAAGATTCATACTGAGAGGAGGATAGCAAAATGGCAGATGGGATGTCGA
GTTTTTGGGGTCCTGTGACCTCTACTATTGAGTGTTGTGAGAAGAACTACGCCTACTCCTCTTACATCGCTGAGTTCTACAACACC
ATCTCCGGTCTCCCTGGAATCCTTCTCGCTCTCATTGGTCTTGTCAATGCCATTAGGCAACGCTTTGAGAAGAGGTTTAGCATCCT
TCACATCTCCAACATGATCCTTGCTATCGGCAGCATGCTCTACCATGCCACCCTGCAGCACGTGCAGCAACAGAGTGATGAGACAC
CAATGGTGTGGGAGATACTTCTCTACATGTACATCCTCTACTCCCCGGACTGGCATTACAGAAGCACCATGCCCACTTTTCTCTTC
CTCTACGGTGCTGCCTTCGCCGCAGTCCACGCTTACCTCAGGTTCGGCATCGGTTTCAAGATCCACTACGTGATCCTCTGCCTCCT
CTGCATCCCTCGGATGTACAAGTACTACATTCACACCGAGGACACAGCGGCCAAGAGGATTGCCAAGTGGTACGTTGCTACGATCC
TAGTGGGAAGCGTGTGCTGGTTCTGTGACCGTGTGTTCTGCAAGACGATATCTCAGTGGCCTGTGAATCCTCAGGGACATGCTCTC
TGGCATGTGTTTATGAGTTTCAACTCTTACTGCGCGAACACGTTCTTGATGTTCTGTCGAGCTCAGCAACGTGGATGGAATCCGAA
GGTGAAGTACTTTCTGGGAGTTCTTCCTTATGTCAAGATCGAGAAGCCGAAGGAACAGTGAGAAAGATCGAGAGGGAAAAAGAGCC
CAGAAGAAGACCTTTATTATATTTTTTTTTGGAAGTAAAACTCTCTAGATACATAAGTCTAGATTCTTTTTTCTTGTATTATTTTT
TATTGGGGATGATGATGATCTTAAGAAGAATTGATTTTTAGCTTTGCTGGGACGCCCTTGTGTTCAATATTTCTTGTGTCATGATT
ACATTCTTCTTACT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_567660 dihydroceramidase [Arabidopsis thaliana] | 1360 | 7e-148 |
| XP_002869828 ATCES1 [Arabidopsis lyrata subsp. lyrata] | 1358 | 1e-147 |
| CAA16783 putative protein [Arabidopsis thaliana] | 1278 | 2e-138 |
| XP_002331534 predicted protein [Populus trichocarpa] | 1198 | 4e-129 |
| XP_002518399 alkaline phytoceramidase, putative [Ricinus communis] | 1193 | 2e-128 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9NUN7 Alkaline ceramidase 3 | 313 | 7e-028 |
| P38298 Alkaline ceramidase YPC1 | 185 | 5e-013 |
| Q02896 Alkaline ceramidase YDC1 | 181 | 1e-012 |
| Q8TDN7 Alkaline ceramidase 1 | 145 | 2e-008 |
| Q9VIP7 Alkaline ceramidase | 131 | 9e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q94IB9 Acyl-CoA independent ceramide synthase | 1360 | 5e-148 |
| O49638 Putative uncharacterized protein AT4g22330 | 1278 | 1e-138 |
| B9N8I5 Predicted protein | 1198 | 3e-129 |
| B9RXD0 Alkaline phytoceramidase, putative | 1193 | 1e-128 |
| B9P606 Predicted protein (Fragment) | 1177 | 7e-127 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G22330.1 ATCES1; catalytic/ hydrolase, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 1361 | 2e-150 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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