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Information for unigene UN18930
| FASTA Sequence |
| Unigene ID: UN18930 | Length: 1316 |
SSR | | GGAAAAAGCGGATCTAAAATGAAAAAAAAAGAAAAAAACATCATAAAGATTCAGTAGAGTTTTACAATAATAATAATAATCAGCCT
CTCAACCGTTGACTAACTAAGTCAACTCTTTTATTTCATGATTCAAAAGTTGTTGTTATGCCTCCCCCACACTCAATACTCTGAAA
CTACAAACCAGTAGGGAGGTAGGTACACTACAAAAACTCTCACTTTTATTCGGTAATAGAGCAAACTAAGTGCTCTCTCTCTCTCT
CTCTCTTTCGCTCAATTTAAGTAGATGCAGGAAGTTCCCAACCATGTGGAATAGGACCATAGTCATAGATGACCTCTCTGTGGCAT
GACCACACCAGCTTTATTGCCTCTGGTGTTCCTATCCCTGCTCCTCTTGGATCCCCAGCAGGACCAAACCAGTGATTCTGAGGAGC
TCCAGTTGTTCTTCCTCTGAGTCCAGCATATGTAGTCCCATTCACCGTGTTCCCTATCACTTCCTGGATAAAGATGGGGTCGTTTG
AAACAACAGCAGCAGTTAGATGAGCGTGCATCCTCTCCAAAGCATCCAACACAAGAGGAAGTTGATCCTTTTTGTATTCCGTTACA
ATCTGAAAGGGTCCAAAGATTTCTTTGGTGACGAGTTCGTAGGTTTTACTGTCCTTCAAGATTTCTTCAATGGGAACATAAACTGC
GGTGGGCTCCAAAGCTCCGTAGATAGAAGGAATAGAGTGGTTCTTCAATGGTTTCCCACCAAAGAGTAGCTTTGAGCCTGGAATCT
TAAGCAGATTCTCCATGTGCTCCAACATTGCCTCTGTTGTAAATGTTAGGACAGGACCAATGGTAAAGTCTTCCAGCTTGCGTCTT
CCTGCAAGATCTTTTAACTTGGAAAGCAGAGGAGTTTTTGACCAGTTCTCATGCACAAAAGGTATAGACTGTGCAGAACACTTCTG
TCCACTGCACGCGTATGCATATTGATCACATACCCATGCAACATAATCAATCTCCTGAACATCTGGTCCCAAGACTTTCCAATCAA
ATCCAGCATCTTCTAGTCTGATCCGACCTTTGAGGTCAAGTGCCAACTTTTCAGCTACTCTAGAGCTACCCGTGAAGAGAGTCATC
CTTGGACTCGCCTCTAGCAATATCTTGTTCATAGTCTTGCCATCGGAGTTTATAAAGTCAACATCTTCAACGGGTAAACCACAGTA
GTGAAGCAACCGCATCATTTGCTCCATTACAATGCTCACCTTGCTGTCCACTTTAAGAAGAGGTTTGTTACCCATGTACAAAGCCC
CCATCAGCTGAAGTAGTGGGATCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34440 unnamed protein product [Thellungiella halophila] | 1739 | 8e-192 |
| AAK73756 delta-1-pyrroline-5-carboxylate dehydrogenase precursor [Arabidopsis thaliana] | 1731 | 7e-191 |
| XP_002866497 ALDH12A1 [Arabidopsis lyrata subsp. lyrata] | 1729 | 1e-190 |
| BAB11503 dehydrogenase [Arabidopsis thaliana] | 1727 | 2e-190 |
| NP_568955 delta-1-pyrroline-5-carboxylate dehydrogenase 12A1 [Arabidopsis thaliana] | 1727 | 2e-190 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8VZC3 Delta-1-pyrroline-5-carboxylate dehydrogenase 12A1, mitochondrial | 1727 | 9e-192 |
| Q40255 Probable aldehyde dehydrogenase | 1584 | 3e-175 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9R960 1-pyrroline-5-carboxylate dehydrogenase, putative | 1604 | 3e-176 |
| C6ZLD1 Delta-1-pyrroline-5-carboxylate dehydrogenase 1 protein | 1585 | 4e-174 |
| C6ZLD0 Delta-1-pyrroline-5-carboxylate dehydrogenase protein | 1583 | 7e-174 |
| A7YVW1 P5CDH1 | 1562 | 2e-171 |
| C5YUI9 Putative uncharacterized protein Sb09g026810 | 1507 | 5e-165 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G62530.1 ALDH12A1; 1-pyrroline-5-carboxylate dehydrogenase/ 3-chloroallyl aldehyde dehydrogenase | 1728 | 6e-193 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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