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Information for unigene UN18940

FASTA Sequence
Unigene ID: UN18940Length: 881 SSR 
GGGCTCCCCTTCTCTTCTCTCTCTCTCTCTCTGCAATGGCGTCTCTTCAGCAAACTATGTTCTCTCTGCAGTCCAAACTCCCTCCC
TCATCTTTCCACATCGCAGTATCTCTCCCTCTGCGAAAGACATCCTTACCCCTCCGAATCAGAGGCGGAAACGCCGCGGGCGCGAG
AATGTCCGCCACTGCTGCAGGAAGCTACGCGATGGCTCTCGCGGACGTCGCGAAGAGGAACGACACTCTCGAACTCACGAGCGCCG
ACGTCGAGAAGCTCGAGAACGTCTTCTCAGACCCGCAGGTGCTCAACTTCTTCGCCAACCCAACCGTCGAGGTCGAGAAGAAGCGC
CTCGTGATCGACGAGATCGTCAAAGCGTCCTCTCTCCAGACCCACACCTCCAACTTCCTCAACCTCCTGGTCGACGCGAACCGGGT
CGACATCGTGACGGACATCGTGAAGGAGTTCGAGATTGTGTACAACAAGATAACGGACACGCAGCTGGCGGAGGTTAGGTCGGTGG
TGAAGCTGGAGCCGCCGCAGCTCGCTCAGATCGCGAAACAGGTTCAGAAGCTGACCGGAGCCAAGAACGTGAGGGTTAAGACGGTT
CTTGATCCGAGTCTTGTCGCTGGGTTTACGATTCGGTATGGTGACTCCGGGTCGAAGCTTATTGATATGAGTGTGAAGAAGCAGCT
TGAGGATATCGCTGCTCAGCTAGAGCTCGGTGAGATTCAGTTAGCTGCATGAGAAAAATTGTATTGACAAAACAACCGCTTCTTCT
TTTTTTACTTGTGCAAGTTTAATTCTTTCTCTCTTTTTTCCTCCATCAATCGTCTACATATAATATATATACTGATATATACTATA
ATTCTCGAGTTGTTTTCAATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002872455 hypothetical protein ARALYDRAFT_489817 [Arabidopsis lyrata subsp. lyrata]9984e-106
AAL69493 putative H+-transporting ATP synthase [Arabidopsis thaliana]9903e-105
NP_192703 F-type H+-transporting ATPase subunit delta [Arabidopsis thaliana]9813e-104
XP_002327324 predicted protein [Populus trichocarpa]7171e-073
XP_002274963 PREDICTED: hypothetical protein [Vitis vinifera]7036e-072

Swiss-Prot top hits (Blast detail)Scoree value
P32980 ATP synthase delta chain, chloroplastic6827e-071
Q02758 ATP synthase delta chain, chloroplastic6423e-066
P11402 ATP synthase delta chain, chloroplastic6146e-063
Q07300 ATP synthase delta chain, chloroplastic5071e-050
Q42687 ATP synthase delta chain, chloroplastic3502e-032

TrEMBL top hits (Blast detail)Scoree value
Q8RY87 ATP synthase (Fragment)9902e-105
Q9SSS9 ATP synthase9812e-104
B9MW43 ATP synthase7171e-073
B9IQM7 ATP synthase6928e-071
Q39409 ATP synthase (Fragment)6165e-062

Arabidopsis top hits (Blast detail)Scoree value
AT4G09650.1 ATPD (ATP SYNTHASE DELTA-SUBUNIT GENE); hydrogen ion transporting ATP synthase, rotational mechanism / proton-transporting ATPase, rotational mechanism9821e-106

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  20%
 
72  40%
 
62  40%

Unigene MembersMember information