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Information for unigene UN18941

FASTA Sequence
Unigene ID: UN18941Length: 1070 SSR 
CCCAAATTATGAAATTTTATAGTTTTCATAACTAGAATTAAAAGGTGGGGACTTAAACGGGAAAATACTAAGCAAACCTCGATTTT
TAAAATTCATATTTTGAACACACAAATAAAAGTAGCACCATCAAAAAAAAAAGAAATGATAATACTAGTGACGGAATCACATAGTG
CGGAACTCTCTCTCTCTCCCTACTCGAAGGTGTCATCATCGTCATCAGGGAGTGGCTGACTTGCTGCCGCTGCAAGCTCCGCCTCA
TGCTGTTGCTGAGCAGCCATGTCAATCTGGACTTCTGGAGGAGCAAGGGCAGGTGATTCCACAAAGTGAAGGTTAGGGTCACCGGC
AAGTTTTCTAGCAAGGTACAAGAATGGCTTCTCGAAATTGTAGTTGCTCTTGGCAGAGATCTCGTAATACTGGAGATTCTTCTTCC
TGTGGAATGTCACCTGCTTTGCCTTCACTTGCCTGTTCTTCACATCAACTTTGTTCCCACAAAGAACAATCGGGATGTTTTCACAG
ACCCTGCAAAGATCACGGTGCCATGTAGGGACATTCTTGTATGTCAGACGTGCTGTGACATCAAACATGATGACGGCACACTGCCC
ATGGATGTAGTAACCATCCCTTAGACCACCAAACTTCTCTTGTCCAGCAGTATCCCAGCAGTAAAACCTGATCTTTCCACAGTTAG
TGAAGAAGTCTAAAGGGTGAACCTCAACACCAATGGTGGGTTCGTATTTCTTCTCAAACTCTCCAGTGAGATGTCTCTTCACAAAG
GTCGTTTTCCCTGTGCCTCCATCACCAACGATGACGAGCTTGAAGCTAGGGTAATCGACGGTTTGCTGGTTAGGTAAAGCCATGGA
TGAAGAAACTGAAGCAGCGTGAGATCCCGAAGAGAAGAGAAGCGAGTCGAGGAGTATATATGAGAACGAGACGGCGAAGGAGTTAG
GGGAAAGAGAGAGAGATAGGGTTTTTAAACAGACTTATGGCCGCTTAAGATTGACGCAAATGCTCTATAACCCGGTAATCCAGAAC
TGGATCCAGATCCGGATCCAGGCCCAAAATTTGCTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAM12880 GTP-binding protein [Helianthus annuus]11903e-128
NP_200330 GTP-binding nuclear protein Ran-3 [Arabidopsis thaliana]11841e-127
CBI21000 unnamed protein product [Vitis vinifera]11841e-127
XP_002864382 hypothetical protein ARALYDRAFT_918663 [Arabidopsis lyrata subsp. lyrata]11832e-127
CBI28152 unnamed protein product [Vitis vinifera]11822e-127

Swiss-Prot top hits (Blast detail)Scoree value
Q8H156 GTP-binding nuclear protein Ran-311846e-129
P41918 GTP-binding nuclear protein Ran-A111749e-128
P41917 GTP-binding nuclear protein Ran-211586e-126
A2WSI7 GTP-binding nuclear protein Ran-111523e-125
Q7F7I7 GTP-binding nuclear protein Ran-111523e-125

TrEMBL top hits (Blast detail)Scoree value
Q8S2Z7 GTP-binding protein11902e-128
B9RP86 Ran, putative11768e-127
Q9FSZ5 GTP-binding protein11732e-126
A9PA03 Predicted protein11722e-126
C6SW66 Putative uncharacterized protein11713e-126

Arabidopsis top hits (Blast detail)Scoree value
AT5G55190.1 RAN3 (RAN GTPASE 3); GTP binding / GTPase/ protein binding11854e-130
AT5G20020.1 RAN2; GTP binding / GTPase/ protein binding11594e-127
AT5G20010.1 RAN-1; GTP binding / GTPase/ protein binding11407e-125
AT5G55080.1 AtRAN4 (Ras-related nuclear protein 4); GTP binding / GTPase/ protein binding7912e-084
AT5G39620.1 AtRABG1 (Arabidopsis Rab GTPase homolog G1); GTP binding2501e-021

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  13%
 
910  67%
 
83  20%

Unigene MembersMember information