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Information for unigene UN18947
| FASTA Sequence |
| Unigene ID: UN18947 | Length: 1567 |
SSR | | AAAATAAAATTATCATCATCAAATATATAATATATCTCCATTTTGATAAAATAGAATACTACTGGGGTCAATAACTGGAAGAGGCT
CCCTTTACACACACTCACTCAGGTGAGGATACACAAAGTAAGATAAATACATAAAACATACATATACATTAATATTTATCTCCTTT
TTCAAATGTTCTTCCTATGTTTCTGTCTTGTCTCTCTCACTCAATCAATGGTCATGGGTTGAGCGCAGCACCTGAACCTGGCTTTA
CGAACATTGTTCATTACCTCTGCCTCGGCTCGCTCGAGCATCATCACAATCTCAGTGAATGGAGGGCGCACTTCAGGGTCAGCGTC
CCAACAACGAGTCAAGATGTTTCTCAGCACAGGAAGGCAATCGTCTGGGATTGATGGTCTCACTCCTCTGTTCACAACCGCAAACG
CTGCTTGTACAGCTGTCATGTTCTGAAACGGTACCATACCCGTTAATAACTCCCATAGCACGATCCCAAAGCTGTACACATCAACC
TTCTGCGTGTAAGGCCTGTGCTGGATCATCTCCGGGGCCATCCAACGGTAAGTTCCTGTCTCAGGAGTCATTCCTTCTGTTTTGAC
CTCGATCCTAGCAACACCAAAATCTGCAATTTTGATGGATCTATCCGCAGAGATTAGAAGATTATCCGATTTCAAATCTCTGTGAA
TATACCCAAGTCCATGCACATATGCCATTCCTGTTGCCACATCCAACGCCTGCTTAACCGCCAGCTTCAAAGGCACTGCTCGGTTC
TGTCTCTTAGTCAAGAACTGTCTCAAGGAGCCTCCCTTGGCATACTCTGTGACAATGCACCAGACCATTGATCTACGACAGGCACC
GATAAACCTGACGATATTGGCGTGCTTCAGCGTAGCAAGCATCATCACTTCCTGCTGAAACTGTTGCCCCATCAGCTGCGCTTTCT
CCGGATCCTCAGGCCTCTCAAGTATCTTAATGGCCACGTCATCACCATTGTACGTTCCTCTGTACAGCTTTCCAAAGGCTCCTTGA
GCAAGAGCAGGGCCCATGTGAAGCTTCCTTAGATCAATCGTCCACTCGTCGAAACCCGCCAATCCTTCAACAGGATGTCTACTATC
CATCAGCGCTTGCTGTAGGGCGTCATCGTTGAGCTCATGGTGGTTCCCTGGACGGTAAACACTGTTCTCAGTAGAACCGGTGTAAT
GCTGGCGCACTGGTTTTAGACCAGGGTGGCCTAAAATGTGTGTTTTAGAATCGTTGGACCCAACACTGCTGTTATCCATCGAGGTT
GCTACAGAAACACCAACAACAGTTGTCTGTAAGCTATCAATTGACATGTTGGAACCTTCAAGTTTATGGTAGTCTTCATAGTAATT
GTTATTGTTGTGGTTGTTGTTGTTGTTTCCTCCCATGAACTTTGGTGCATCGATCATTTTTTCCCCCCAATTATTCAACAAATTTG
TAGCCACTGATCAAAGAATCTTTTATATTCAGAGGACGATTCCAAGCCTGAGAGAGCGAGAGAGAGAAGAGAGGACCCAACACGAG
GAACGACGATGAGAGACCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002528001 serine/thronine protein kinase, putative [Ricinus communis] | 1665 | 4e-183 |
| ABK95868 unknown [Populus trichocarpa] | 1641 | 2e-180 |
| XP_002330783 predicted protein [Populus trichocarpa] | 1641 | 2e-180 |
| XP_002332108 predicted protein [Populus trichocarpa] | 1633 | 2e-179 |
| XP_002283465 PREDICTED: hypothetical protein [Vitis vinifera] | 1624 | 2e-178 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q2MHE4 Serine/threonine-protein kinase HT1 | 694 | 7e-072 |
| Q55GU0 Probable serine/threonine-protein kinase DDB_G0267514 | 516 | 3e-051 |
| Q55A09 Probable serine/threonine-protein kinase DDB_G0272254 | 470 | 6e-046 |
| P80192 Mitogen-activated protein kinase kinase kinase 9 | 459 | 1e-044 |
| Q16584 Mitogen-activated protein kinase kinase kinase 11 | 452 | 8e-044 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SPT2 Serine/thronine protein kinase, putative | 1665 | 3e-183 |
| A9PHL5 Putative uncharacterized protein | 1641 | 2e-180 |
| B9N6E2 Predicted protein | 1641 | 2e-180 |
| B9NA34 Predicted protein | 1633 | 1e-179 |
| A5BI75 Putative uncharacterized protein | 1624 | 2e-178 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G24360.1 serine/threonine/tyrosine kinase, putative | 1588 | 1e-176 |
| AT4G31170.1 protein kinase family protein | 1583 | 5e-176 |
| AT4G31170.2 protein kinase family protein | 1583 | 5e-176 |
| AT4G31170.3 protein kinase family protein | 1583 | 5e-176 |
| AT1G62400.1 HT1 (high leaf temperature 1); kinase/ protein serine/threonine/tyrosine kinase | 694 | 6e-073 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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