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Information for unigene UN18981

FASTA Sequence
Unigene ID: UN18981Length: 2095 SSRSNP
GGGTCTTCTTCTCTCCATCATTGTTTCTTTCTTTGCCCATTCTCCTTCTACTTTTGTGCTCTGCTTCACTTTTTTTATTCCTTCCT
CTCTCTCTCTCTCTTCACGATTCACGACAACCACCACCACAATGCCGGGAGTTGCTTTTTCATCTGTTGCTTCCTCCTCCTCCGAT
CTGGGAATCTTCTTCTCCGAGGTCACGGCCTACTCCCGTCGTATCTCAGCCTCGCTCTCATCTTCATCCTCTTCCTTTCGCTGTTG
CATCCTCCCATTGAAATTAAATATCAGATCGCTACGCTCCCGTAAGCTACCTCCTATTTGTTGCGATTCTAGTTCTACCTCCCGAT
CCGGCCTAGGGGATCCCGATCTTGAGTTTCTCCAAGCCTCCGTCCTCGTTGCAGAGACAAGTATGCATTACAAAATGAGGAGACAT
GGATTCCGGGAAGATTCCATTTGGCAAGCTTCAAGGCATCTCCCTCCTTTTGCTGTGCGAGCCAGTGAATCCAGGGTTGGTGTTCT
CCCTATTGGTCTTGGCTTCCTCCGCCAATTCACCCACCCCACTATTTTTCTCAAGATCTCTTGTGATGGCGACTACTTGCTTCCCC
TTATTGTTGCTGATTCTGCTGTTGAGAAACTATTAGACGTACCTCCTCTCCATGGCCCCATTGAGGAATGCCCTGATCAGTTCCAC
TTTGTGTCTTCTCTTGTCGACAAACTTGGCCATGAGGTTAAAATGGTGAAGCTTACAAGTAGAGTATTCAACACTTATTATGCAAG
CCTATATCTCGGCAAGCCAGGAGACAATGATGTTATATGCATTGACTCACGGCCATCTGATGCCATCAACGTTGCAAGAGCATGCC
AGGCTCCGATATATGTGAATAAAACAATAGTCCTGGAAGATGCTATCAAGATTGGTTATGGAGGCAGACCGCAGAGCACAAAGCCC
ATTTTCAATGTTATCCTTGACAGCGCTCCAGAGGGACCAGATCCCATATCGGAGGAGCTTAAACTACTGAGGAATATGGATTTGGC
GTCTAAAGAGGAAAGGTACACCGACGCAGCGATGTGGAGAGACAGATTGAAGAAGCTTCAGAACTCGAGCTCTGTTGTATACGAGG
GTGTAGCAACTCCTGAGAGCTACGACTAGAGAAAGAATAGGAGGAAATGGATGTAGATAAAGGCTTGGGTCAAGAGAATGCAGGTG
TGATGAAAAGGGTATGGTGAGGACTCAGGAGAAATATAAGATGCGCTTAGATTGATAGGGTATCCCTATCGCATGTAGTAAGTTTA
GAGGAAGGGCGTTGATTGTCGGTATTATGAAGAAACTAAAAGTAGACCAAAGATGAAATGAATATCCGAGGGAAAGTGTAAAAAGA
ATGTAAATAGAAGAATGACGATGAATACATTTTTTTTTTTCTTTTTGGTGTACGTGAGTTTCTATCTCTGGTCTTTATCTCATCAG
CATGCAGTGTAAGCCTACACTCATTGTTTCCCTTGGGATTTGGTACGTGCAACTACGGCCTCCTCTCCATTTTCTTTCTGCCGCAC
CTAACTCAACAACGTGATCGCATGCTACTTTCTCAATTCTTTGTTGATATATATAAATACAATAGGACATATCGATGCAATTGACA
CAACACCCCACTCATAAGTTGTGGGTATAACAGCTGCAAGCACACAATGGAAGAGAGAAAGTAGTTCATTTTACATCTGGAAAACG
CACTCCTGATGTATTTATTATCAAAGAAAAAGACAAAAGACATTATGGTGGTGAGTGGTGGGTCATCATCATCAGTATTGTGTAGG
AAGACCATTCTGGGTCCAGGCAGAGTAGCCACCGGAGATATCTTTGACTCCCGTGAAACCCTGCAGTTATTCCCAAATAGTATTAC
TAAAAGTTAAATAACATGATAAGCTTCAAAGTTAGAAAGAGTTCTGTTGGGATGGGTTACGGCAGCAAGAAGCTCAGCGGTGGCTT
TCAAAGATCTACCCCCGCTCTGGCAACCAACAACGACTTCATCGGCTTTACCGAAATGGGAGGAGACTTGTTCCAAGAAGTTAGGA
TTCTTTGACATCCCTGCATTTTGCAGTCGGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_201406 Wound-responsive family protein [Arabidopsis thaliana]13654e-148
NP_974999 Wound-responsive family protein [Arabidopsis thaliana]10822e-115
BAB10410 unnamed protein product [Arabidopsis thaliana]7426e-076
XP_002270466 PREDICTED: hypothetical protein [Vitis vinifera]7426e-076
XP_002530645 conserved hypothetical protein [Ricinus communis]7292e-074

Swiss-Prot top hits (Blast detail)Scoree value
Q39129 Thiosulfate sulfurtransferase, chloroplastic1786e-012
P27626 Senescence-associated protein DIN11501e-008

TrEMBL top hits (Blast detail)Scoree value
Q8GWL4 Putative uncharacterized protein At5g6605013652e-148
Q3E853 Putative uncharacterized protein At5g66050.210822e-115
Q9FKX7 Genomic DNA, chromosome 5, TAC clone:K2A187424e-076
B9SXC6 Putative uncharacterized protein7291e-074
B9MX91 Predicted protein6252e-062

Arabidopsis top hits (Blast detail)Scoree value
AT5G66050.1 LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF151 (InterPro:IPR003729); BEST Arabidopsis thaliana protein match is: wound-responsive family protein (TAIR:AT1G19660.2); Has 338 Blast hits to 338 proteins in 128 species: Archae - 11; Bacteria - 214; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).13661e-150
AT5G66050.2 LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF151 (InterPro:IPR003729); BEST Arabidopsis thaliana protein match is: wound-responsive family protein (TAIR:AT1G19660.2); Has 338 Blast hits to 338 proteins in 128 species: Archae - 11; Bacteria - 214; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 46 (source: NCBI BLink).10836e-118
AT1G19660.1 wound-responsive family protein2897e-026
AT1G19660.2 wound-responsive family protein2897e-026
AT1G75380.1 wound-responsive protein-related2682e-023

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
93  20%
 
183  20%
 
106  40%
 
82  13%
 
201  7%

Unigene MembersMember information