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Information for unigene UN18990
| FASTA Sequence |
| Unigene ID: UN18990 | Length: 1322 |
SSR | | GGCCCAAATGATCACCAATAATCATTATTTTCCTCTCTCTCTCTTAAATAATTATCCGCTAATCAAAAAGAGCCTCATCAAATATT
AAAAACCTAAAATCTAACCATTCAGAGAGAGAGAGAGAGAGAGAGAGAGAGCATGGAGTCGGAGGAGAAGAAGGAAAGTAGTATAA
GCACGGTGGAGGCAAAGTTGCCCCCAGGATTCAGGTTTCACCCAAAAGATGACGAGCTTGTCTGCGATTACTTGATGGCACGATCG
CTTGGTGACAATATAAATCAAACTCCTCCTCCTCTCCTCTTGATCCAAGTCGATCTCAACAAGTGCGAGCCTTGGGACATCCCCAA
AACGGCATGCGTGGGAGGCAAAGATTGGTATTTCTACAGCCAAAGAGATAGGAAATACGCGACGGGGCTGAGAACAAACAGAGCAA
CGGCCACCGGATATTGGAAAGCCACAGGGAAAGACAGAGCCATTCTAAGAAAGAGTAAGCTTGTTGGGATGAGGAAGACATTGGTG
TTCTATCAAGGTCGAGCGCCCCGTGGTCGTAAAAGTGATTGGGTCATGCACGAGTTTCGTCTCCAGGGTTCCTTTGATCCTCCTAC
TCTGAACTCTCCAGAGGTACAGGAAGACTGGGTCTTGTGTGGAGTGTTCCACAAGAACACAGAAGGAGTTTTAAGTAGAGACAACG
TGGGAAGCTGTTTTGACGAGACAGCCTCCGCTTCTCTTCCTCCACTGATGGATTCTTACATCAACTTTGACCAAGAGCCCTCTTCT
TACCTCGGTGATGATCAGCACTTCATCACCAATGAGCAAGTGCCCTGCTTCTCCAATTTGTCAAGGAACCAAACCCTAACCAACTC
AGTTTTTGAACTCAAGAAGAACCCTATCCCCTTGTTCACCGGTGGTTCAGCCCCCACCACGCTCCCAGGGTTAGACTCGTTCTGTT
CTTCAGATCAGATGGTTCTCAGAGCTCTGCTCAGCCAGCTCACTAAGATAAATGGAGGCATTGAGGTTAAAGAATCACAGATTTAT
GGGGAAGGTAGCTCCGAGAGCTTCTTGACCGACATTGGCGTACCAAGCACTGCGTGGAATTGATGATGGTCGAGTGTAGTAGTGCG
AGTCGTTATTGCTATATTCATATTCATGATTGGAACCATTCTTCAAGGGGTGAGGAGGAGTAAGGTGTGTGTGTCTGATTGTACAA
ACATTTCCCTCACTCTTGTACAACTCATGTAAAATACCACTTAAGACATTACAATACATATGAATTTCATCATAGCTCCATCTGTT
TTGGTGTAATAATTAATCAAGAATACTATATG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002894549 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1378 | 6e-150 |
| NP_175997 NAC domain-containing protein 21/22 [Arabidopsis thaliana] | 1369 | 7e-149 |
| BAJ33921 unnamed protein product [Thellungiella halophila] | 1317 | 7e-143 |
| NP_849817 NAC domain-containing protein 21/22 [Arabidopsis thaliana] | 1090 | 1e-116 |
| AAK84883 NAC domain protein NAC1 [Phaseolus vulgaris] | 875 | 1e-091 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q84TE6 NAC domain-containing protein 21/22 | 1370 | 2e-150 |
| Q9FRV4 Protein CUP-SHAPED COTYLEDON 1 | 474 | 2e-046 |
| O04017 Protein CUP-SHAPED COTYLEDON 2 | 470 | 5e-046 |
| Q9S851 Protein CUP-SHAPED COTYLEDON 3 | 461 | 6e-045 |
| Q9SV87 Protein BEARSKIN1 | 419 | 4e-040 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q93XA7 NAC domain protein NAC1 | 875 | 9e-092 |
| B2ZGS0 NAC domain protein | 874 | 1e-091 |
| B9HH13 NAC domain protein, IPR003441 | 871 | 3e-091 |
| C6TN89 Putative uncharacterized protein | 869 | 4e-091 |
| B9SVD5 NAC domain-containing protein 21/22, putative | 860 | 5e-090 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G56010.2 NAC1; transcription factor | 1370 | 2e-151 |
| AT1G56010.1 NAC1; transcription factor | 1090 | 6e-119 |
| AT3G12977.1 DNA binding | 718 | 8e-076 |
| AT5G61430.1 ANAC100 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 100); transcription factor | 500 | 1e-050 |
| AT3G18400.1 anac058 (Arabidopsis NAC domain containing protein 58); transcription factor | 490 | 2e-049 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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