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Information for unigene UN19011

FASTA Sequence
Unigene ID: UN19011Length: 1427  SNP
CATAGAACATTGGTCTAGTCAACTTATATTTCAATAAAACATTATCTTCACAAATATGGATCATATTCTTTTTTCACTGTATATAA
TAAAAATAGTAACCCCAAAGTAAAATATAAAATGTAACATTCTGTAAAAATGGGGAACTCATGAAACCATACAAAGAAACTTCACC
AGCGGTCTTACGTCCCCCTGGTAGCATATATTTCATCTCCCTTCTCTTTTCTTCTTCTTCCCCTGTATTGCCACCACAGTTATGTG
TCTGCTTCCAAAACTGTGAGACTTTGTTACAAAAATAAAAACAAAACTCTTTCTCCTTTTTCAGATTGATTGTCGCTTGTTGAATG
GTTTTTGGCAGATGAGGAGTCTCTGTTCACTGTTGCTCTCAACCTCTATGACTCTAGCCTCCCACTTCAACTGCGTTGTCAAAGCT
CTAGCCGCTTCAACCAGCTGCGTCGTGTCACGGATTATCACCCATCCCTCTGGACGAAGTACTCTATCAACCTCTGTCAATATTTG
CAGAAGCGAGCATGAGCTTCTGTGCTGACTTGTCTGAAGCGACAAAAGACTGTCTGCGTGAACCAGATCATATGTTCTCGGATAAG
TAGGAAACGCTTCACACCAGTCGTGTAAGACTCCGACGAAGCCACGGTCAAGGATCATTGGGAGGTGGTTTGGTCCAGCTGTAGGG
ACAACATTCATGACCCAGACCGATTTCTTTGCTTCCAACAAGGTGGCATTGAGCCCACCGTATTGTGCATTCATGTCCAAGACGTT
TCTGAGCATGTTATAAGGAGGAGACGGATCTTCGTCCCCTGGTCTTTTGGGATGGTCAGAGAATATCAGAGGAGACAAGAGAGACC
AGTAGTTTCTCACGTTTAGTTTCCAGTTCGCTGCATCTTCTCCAACCTCCTCCGGGTGAAGACCATATTGTGAAAGTTCAGTCTTG
TTCATGTTAGACCGGGTAGGCCATTTTGTCCTGCCTTCAATGGGAATCCACCTCCGGCTACGTGTTCCACCAAGACACATCTGAAG
CGGCCTGTAATAAGGAGACTCAACGTCGTGCCCTTTGCTACACACAGAAGGTCCCACCCCAGGCTTCCTTGAACTGTAACATTTTG
TTTTGACCGTCTTTTTCCAGACAACTGTCTTGTCTTGCTGAGACAAAAGAGTCCAACATATGCTGTCAGCAAAACCACGAACAAAG
TTCCATCTCTTTATATCCTCTTTGCTACGAGCGTTTGTGAGCGGAGATGTCCAAACAAAGTAACCTCCAGGCTTCAGAACCCTGCC
AACTTCCACAAGGAGAAGACCATCTTTCTGGTCCCAGTCAATACCACATCCTGAGCAATGCAACATATCAAAGGAAAGAGAAGGAT
ATGGCAATTGCTTTGACACAAAAGAACCAATCATAGCAGGTAAACCCCACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABV89659 dehydration-responsive protein-related [Brassica rapa]18662e-206
XP_002889181 hypothetical protein ARALYDRAFT_895718 [Arabidopsis lyrata subsp. lyrata]17854e-197
NP_177948 putative pectin methyltransferase QUA2 [Arabidopsis thaliana]17613e-194
AAG52090 unknown protein, 5' partial; 69506-67937 [Arabidopsis thaliana]17613e-194
XP_002285784 PREDICTED: hypothetical protein [Vitis vinifera]15042e-164

Swiss-Prot top hits (Blast detail)Scoree value
Q9C9Q8 Probable pectin methyltransferase QUA217611e-195
Q8GYW9 Probable methyltransferase PMT411023e-119
Q3EC77 Probable methyltransferase PMT56589e-068
Q8VZV7 Probable methyltransferase PMT94186e-040
Q8H118 Probable methyltransferase PMT14123e-039

TrEMBL top hits (Blast detail)Scoree value
A8IXV9 Dehydration-responsive protein-related18661e-206
A2X9R4 Putative uncharacterized protein13392e-145
A3ABH3 Putative uncharacterized protein13392e-145
Q6Z692 Putative early-responsive to dehydration stress protein13392e-145
C5XYD4 Putative uncharacterized protein Sb04g02750013231e-143

Arabidopsis top hits (Blast detail)Scoree value
AT1G78240.1 TSD2 (TUMOROUS SHOOT DEVELOPMENT 2); methyltransferase17627e-197
AT1G78240.2 TSD2 (TUMOROUS SHOOT DEVELOPMENT 2); methyltransferase17627e-197
AT1G13860.2 dehydration-responsive protein-related10987e-120
AT1G13860.4 dehydration-responsive protein-related10987e-120
AT1G13860.1 dehydration-responsive protein-related10987e-120

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
115  50%
 
101  10%
 
94  40%

Unigene MembersMember information