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Information for unigene UN19013
| FASTA Sequence |
| Unigene ID: UN19013 | Length: 1100 |
| SNP | CTGGTGCAGATGGCTCTGGAAACTTTTATGGACGTTCTGGTACTGGAGGAATGATGCCTGGAATGCCAGGGGCTAGGAAGATGCCG
GGAATGCCAGGTGCTAGGCAGATGCCAGGTATGCCTGTAACAGATGATGACGGCTGGGAGATGGCACGGTCCCGCTCCATGCCCAG
AGGGAATAGGCAGAATCAGCAGCCTGCAGGGCGCGTTCAGTCTCCCGCTATCAACAAGTCACCGTCCGTTAATTCAAGGCTCCTAC
CTCAGGGTAGTGGAGGTCTCTTGGCTGGAAGACCAAGTGCCCTTTTACAAGGTACTGGTGCCGAACAGCCGAAACCCCTTCCTTCC
CCAAGCAAACCAGCTGTGGAGAAGCCCCAGTCGCAACCACAGCCACAAGAGGCAGCTTCTCCTATGGCCACTTCATTTTACTCAGA
AGTGCTCAGCAGAAAAACCAAGTCGCTTTTGGAAGAATATTTCAATGTACGTCTAATGGACGAGGCATTACAATGCGTAGAGGAAC
TGAAAGCCCCAGCTTACCATCCGGAGCTTGTCAAGGAAGCTATCTCCCTCGGCTTGGAGAAAAATCCACCGTGCGTTGAACCAGTG
GCGAGACTCTTGGAATATTTGGTCTCCAAGAACGTTCTAGCTCCTAAAGACATCGGGAGTGGTTGTCTGCTTTACGGGTCTATGCT
CGATGACATTGGGATCGATCTGCCAAAGGCACCAAACAACTTTGGGGAGATCCTTGGGAGTTTGGTTATGGCCAATGCATCGGATT
TTGGGACGGTGGAAGAGATTCTAATGAAAATGGAAGATGATCGGTTCAAGAAAGCAGTCTTGGATGCTGTGATAAAGAGTGTTAGC
GAATCTCTGTTGGCCGCGCAAGCAGCTAAAGTCGAGGCTTGCCGTAGTTTGGTGTAAGCTTTTGTGTGGTTTCATCTCTGTTACAG
GATACTTCAATACATCCTCTATTTCCTCTGTTTTGATAAGCATTTTTCGTTTCTGGTTCAACCTGAATATGTTTGAATAAATTTGG
TTATGTATCCTTCGTTATATGGACCATTTGTTAGTGAATGAATTCACATTTTGAGAATTATTACCCCG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002867334 hypothetical protein ARALYDRAFT_353746 [Arabidopsis lyrata subsp. lyrata] | 1156 | 3e-124 |
| XP_002880542 MIF4G domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 923 | 3e-097 |
| NP_179983 MIF4G and MA3 domain-containing protein [Arabidopsis thaliana] | 921 | 5e-097 |
| AAL32572 putative eukaryotic initiation factor 4, eIF4 [Arabidopsis thaliana] | 920 | 6e-097 |
| XP_002534061 Eukaryotic initiation factor iso-4F subunit p82-34, putative [Ricinus communis] | 908 | 1e-095 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q03387 Eukaryotic initiation factor iso-4F subunit p82-34 | 547 | 5e-055 |
| Q76E23 Eukaryotic translation initiation factor 4G | 141 | 6e-008 |
| O43432 Eukaryotic translation initiation factor 4 gamma 3 | 140 | 7e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O82233 Putative eukaryotic initiation factor 4, eIF4 | 921 | 3e-097 |
| Q8W4L4 Putative eukaryotic initiation factor 4, eIF4 | 920 | 4e-097 |
| B9T742 Eukaryotic initiation factor iso-4F subunit p82-34, putative | 908 | 1e-095 |
| Q9SUH8 Translation initiation factor-like protein | 858 | 6e-090 |
| Q8H179 Eukaryotic initiation factor 4, eIF4-like protein | 844 | 3e-088 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G24050.1 MIF4G domain-containing protein / MA3 domain-containing protein | 961 | 4e-104 |
| AT4G30680.1 MA3 domain-containing protein | 859 | 3e-092 |
| AT5G57870.1 eukaryotic translation initiation factor 4F, putative / eIF-4F, putative | 850 | 3e-091 |
| AT5G57870.2 eukaryotic translation initiation factor 4F, putative / eIF-4F, putative | 850 | 3e-091 |
| AT3G60240.2 EIF4G (EUKARYOTIC TRANSLATION INITIATION FACTOR 4G); translation initiation factor | 141 | 5e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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