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Information for unigene UN19047
| FASTA Sequence |
| Unigene ID:UN19047 |
Length: 3254 |
TTTTTTAGTTCATCCTATTGGCTCGGCTTTTAGGAAAAAAGTATCTTTCAAATTGGAGATTAAGCTATCTATAATAATATGAATAC
GACCTTTATTCTTCTGTTTGTTTGATCTAAAAACGAATCGAATTAAAAATATTCCGCGAAGGTCCGTAGTTGTAGAAACTAAGACT
CATTTTTTATCATTCAATAAGCATCTTGTATTTCATAAAAATTGGGGGCAATATAATCCTTACGTAAAGGCCACCCTATCCAACTT
TCGGGCATTAAGATCCGTTTCAGCCGAGGATGGCTATCATAAGTGATTCCTAACATATCATAAGATTCCCGTTCTTGAAAATCCGT
ACTTTTCCAAACCCAGAAAACAGATGGAATTCTGGGATTACTCCTGTGAGTAAATACTTTTATGCAAACTTCTTCCGCTTGATTGA
CACCATATTCTATTCTCGTAAGATGATACACACTGGCTAAGAGGCCACCTGGTGCCACATCATAGGCACATTGGGAACGTAAATAA
TTGTAACCATATACATATAAAATTACAGCAATAGAATGCCAATCTTCGGGCTTTATTTGTAAAGTCTCTATTCCTTGGTAATCGAA
GCCCAACGATCTATGAACCAGCCCCCGTTTGGCTAGCCAAACGGACAAAGTGCCCTGCATCTTTTTTATTTCCCCCACACCTTTTT
TATATAAATTTAAGTCTTTCACATTTACCATGAGTTCTAATTTATGAAGATTTTTTTCTTATTCTCTCAAATCCTCCCTAATTCAC
TAATTCGTGGGAAGATACTGGGCTTTTGTATTTAAAAAATGTTTCAGTAGAGATCTCTGAAGTAGATGATGGTGGATAGAGTAATT
CTTGATCATAATTTCCAGTCTGCGTACTGCGTACAACAAAAAACTTGTGATTGGTAGTAAAACACCGATTACCCCGTTGAGGTCTA
ATTCGATCCTTATAGATTTCTCTAGCTATTTTCTTACGAAGCTTTGTTATAGCGTCTATAACAGCCTCTGGTTTAGGTGGACAACC
CGGCAAATAGACATCTACAGGAATTAGCTTATCAACCCCTCGAACAGTACTATAAGAATCGGTACTGAACATCCCCCCTGTAATTG
TACACGCTCCCATAGCAATAACATACTTTGGTTCAGGCATTTGTTCATATAATCTCACTAAAGAAGGAGCCATTTTCATTGTTACT
GTACCTGCTGTTAAAATAAGGTCCGCCTGCCTAGGACTTGATCTTGGTACTAGCCCATAACGATCAAAGTCAAATCGGGAGCCTAT
TAATGAGGCAAATTCAATAAAACAACAACTGGTACCATAAAGAAGCGGCCATAGGCTGGAAAGTCTTGACCAATTTGAAAGATCAT
TTAACGTAGTTGAAATAACTGAGTTTTTTGTTGTTCGATCAAGTACGGGAAACTTAATGGAATTCATAATTGTTTCAATGGTTTTT
TTTACTTTTTTTTTTTTTTGTTATTGTACAAGTATTCAGGAAACGAACTAAGACCATTCCAACGCTCCTTTTCGCCATGCATAAAC
TAAACCAAGAATTAGGATAAGCACGAAAATGAAAGCTTCTATAAAAGCGGATACCCCTAGTACATCGAAACTCATTGCCCACGGAT
ACAGAAAAACGGTTTCAACATCAAAAACAACAAAAACTAGAGCAAACATATAATAACGGATTCTAAATTGTAACCAAGCATCCCCG
ATCGGTTCTATACCTGATTCATAACTAGAAAGTTTCTCCGGCCCCTTCGTAATTGGAGATAAAACCCCGGAAATTAGAAATGCCAA
AACAGGAATAGCACTTGATATTATTAAAAATGCCCAGAAAATATCATATTCGTAAAGCAGAAACATAGACGAACTCCTATGAATGT
GGAAAAAATACCCGCTTAGTCACTTCCAATCGGAGTGGATTGGGCAAGGGATATATAACTCTTGCTTCAAAACCAAAATTAAGGTT
AATCGAATTAATCGAATTATTTATTTTTGTTTGGTTGCTGTGGTAGACGTCCCCTTTTAAGATTTATTGATTGTAATCTTATTTTC
AGTACACTTATTACTTAATATTTCCATGTTTCTATTACTAATAGTTTCTCCCATTAATAATATAATATTAATATGATTAATAACTA
GTAATTTTTTTTATTTCTGTTTCTTAAATTTGTTTTATGTTTTATTTAAAAATAAAACATAATTGATAAAAATATCTTCGTTTTTA
AAATTATGACGTATCAAAAAATCCACTTACGACTAATGAATAAAAAACGTTTATTCTAAATTATAAGTATATATCTAGATATATCG
ATAGATAGTGATTGGATCCACCGAAATCAAATGAAATCAAATTTGGTTTTACGTTTTATTCTGAACGATCCCCAGGACTTATGGTT
TAGGGTATGGGAGTTTTTTTTATGAACCAACAAATTGAAAGTAACCAGTTAGAAATAAAGAATACAATAATTAAGTAATAAGTCAA
AAATTATCCAATTATTTGGATTTGAATGTCATTTATTAGAATAAATTTATTAGTTAGGGCTATACGGATTCGAACCGTAGACCTGC
TCGGTAAAAGAGCTCGAACTTATTATTATCAAAATGATTCGAACTCTTTCAAAGACCCAACATGCATTTTTTTTTTGCATTGGGCT
CTTTCATTAACTGATAGAAAGATCAGTTAGTCTACCATATTTTTTCTTAAAAAAAAAAGATAAGAAATGGTTCCAAGTACTCTGAT
TGATTATTTTTTAATTCTATAATTCTAATACAATACAGAAGAACTACCAAAGTGTTTCAAAGAAGGGTTGGGTTCTCTTGACGTAG
GTTTGCTTTTGGTCTAGATCAACTTAAGTTAAATATAGTCTCTAACATCCTGATTAAAAAATCAAATATGAAACTTGCTACACCTT
AAGGTTCATAGGACGAAAAGATCATTTTTGAGTTCCTTATACTCATTCTGCCTAGCATTAAGTAGACTGGGTATTCACCCTATCAA
TATCTCAAATCAATGATGGGTTCTATTAATTCCCTACCTAAATGGGGTACTTTAATAGGACCTAATGTCAGGCTATTGTTCTCCTC
TTTTTCCTAAAAAAAAGTCATGGAGTAAGACATCGATTTATTAATAAGATCAATCAATTGGTTTGATTGCGTGATGGACTCCTCTG
AAAAACTTTGGCGCACGTGTAAACGAGGTGCTCTACCTAACTGAGCTATAGCCCTTGTGTTTATGATCCATC |
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| GenBank top hits (Blast detail) |
Score | E value |
|---|
| ACY66269 NADH dehydrogenase subunit K [Brassica napus] | 1175 | 6e-126 | | YP_001122950 photosystem II G protein [Aethionema cordifolium] | 1167 | 5e-125 | | YP_001123729 NADH dehydrogenase subunit K [Lobularia maritima] | 1162 | 2e-124 | | YP_001123119 NADH dehydrogenase subunit K [Olimarabidopsis pumila] | 1160 | 3e-124 | | YP_001123377 NADH dehydrogenase subunit K [Capsella bursa-pastoris] | 1156 | 1e-123 |
| Swiss-Prot top hits (Blast detail) |
Score | E value |
|---|
| A4QJB9 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic | 1167 | 2e-126 | | A4QLJ8 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic | 1162 | 8e-126 | | A4QJT7 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic | 1160 | 1e-125 | | A4QK22 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic | 1156 | 4e-125 | | A4QKJ6 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic | 1156 | 4e-125 |
| TrEMBL top hits (Blast detail) |
Score | E value |
|---|
| D1L8P2 NADH dehydrogenase subunit K | 1175 | 4e-126 | | D3WB90 NADH-plastoquinone oxidoreductase subunit K protein | 1119 | 1e-119 | | D3WEC6 NADH-plastoquinone oxidoreductase subunit K protein | 1112 | 9e-119 | | D3WEJ5 NADH-plastoquinone oxidoreductase subunit K protein | 1099 | 3e-117 | | D3WAT2 NADH-plastoquinone oxidoreductase subunit K protein | 1096 | 6e-117 |
| Arabidopsis top hits (Blast detail) |
Score | E value |
|---|
| ATCG00430.1 Encodes a protein which was originally thought to be part of photosystem II but its wheat homolog was later shown to encode for subunit K of NADH dehydrogenase. | 1154 | 6e-126 | | ATCG00420.1 Encodes NADH dehydrogenase subunit J. Its transcription is increased upon sulfur depletion. | 863 | 3e-092 | | ATCG00440.1 Encodes NADH dehydrogenase D3 subunit of the chloroplast NAD(P)H dehydrogenase complex | 611 | 6e-063 | | AT5G11770.1 NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial | 403 | 7e-039 | | ATMG00990.1 NADH dehydrogenase subunit 3 | 194 | 1e-014 |
| EST library breakdown for ESTs in the assembly |
| Unigene Members |
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