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Information for unigene UN19055

FASTA Sequence
Unigene ID: UN19055Length: 1195 SSR 
GGACTCCTTTTCATTTTATTTAATCGGAAAAGAAAAACGAAATAACGAAGACTCTTATTCGAAGCTACACAAGCCATAGCTCCTGC
TATTTCTTCCCGTCTCTCTCTTCTTTGACTTTTTTTCCCAGTTTGAGTTTTTTTTTACAGATCATCAGATTTGGTTTCATATTCAG
ACGCTGAGATTTCAGATTCCTGAAAGATCTGGCTATTGATCGAAAGAGTGAAACAAAAAAAATGGACTACCCTGAAAGTTATCGGA
TAACGTTTACTGGAATCTTGGTTGCTTTTCTTGAATTAGCATTTGCTTATTGTCTATTATGTGTATCAGCTTTGGTCTTTATTGCG
TCCAAGTTCTTACTCTATTTACCTTGTCCCTCTTCTGGAATGCTTGGGTACCAAAACGTCCATAAACTTCTCTTTGACTTGCCATT
CGAGATCATACTCCGAATCCAGAAGATGGCCGTTGCCAGTAGAACAAGCGTTTGGCATCATCAAGACCAAGAAGAAGAGAGAAAGA
GTTCGGTTGGTAAAGATAAGAACTTGGAATTAATGAATAAGGTGAGATTGCTTGAAGAAGCTGTTGAGGAAGAGAGGTTGGCTCGA
TCTGCTCTAATCGTGGAATTGGAGGAAGAAAGAGCGGCTTCAGCGTCAGCAGCTGATGAAGCCATGGCTATGATTCTGAGGTTACA
AGCTGATAAAGCTTCACTTGAAATGGAAGGGAAGCAGTATGAGAGAATGATTGAGGAGAAATTTGCATATGATGAGGTAGAGATGA
ATATTCTCAAGGAGATTTTATTCAAAAGGGAGAGGGAAAGGCATTTTCTTGAGAAGAACTTGAGACTTACAAGCACATTGATGATG
ATGATGATGATCAAGAAGCGATTGTGTATGATGTTCATGTCATTGAAAATGATAATAATGCTAAGAAGAAAGATGTTGACGCAGCA
GAACATAAAGTAAGGGACTGTGATGATCAAGTGAAGCAAATGGATGACTTATTGAAGGATAGTGATTCATCAACATAACCTTCTTA
ATAAAGTTTTTCTGTTGGTTGTAATATCTTTGCTATCTTGCTTACTCTGTTTTCTGTAATGTGGTTTGGGTAGACTTTGTATAAAT
TTGTGAAAATATTAGTGTACAACTTTGTGACATCTGTAAACGCATCAAATGATATTAAGATCGCTTTTATTTGTATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002863266 hypothetical protein ARALYDRAFT_497080 [Arabidopsis lyrata subsp. lyrata]8283e-086
NP_193052 uncharacterized protein [Arabidopsis thaliana]7262e-074
XP_002521088 conserved hypothetical protein [Ricinus communis]3419e-030
CBI17315 unnamed protein product [Vitis vinifera]3346e-029
XP_002266466 PREDICTED: hypothetical protein [Vitis vinifera]3311e-028

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9SVR1 At4g131607261e-074
B9S519 Putative uncharacterized protein3416e-030
B9RWI0 Putative uncharacterized protein3282e-028
B9IJH5 Predicted protein3246e-028
B9RWI2 Putative uncharacterized protein3221e-027

Arabidopsis top hits (Blast detail)Scoree value
AT4G13160.1 unknown protein7464e-079
AT4G13630.1 unknown protein3012e-027
AT1G04890.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Intermediate filament protein, conserved site (InterPro:IPR018039), Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13630.1); Has 6609 Blast hits to 4661 proteins in 382 species: Archae - 48; Bacteria - 283; Metazoa - 4004; Fungi - 343; Plants - 346; Viruses - 6; Other Eukaryotes - 1579 (source: NCBI BLink).2868e-026
AT1G70750.1 unknown protein2142e-017
AT5G16720.1 unknown protein2097e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  10%
 
104  40%
 
71  10%
 
83  30%
 
111  10%

Unigene MembersMember information