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Information for unigene UN19062

FASTA Sequence
Unigene ID: UN19062Length: 1424 SSR 
GGGACGACGACGACGACGACAATGGCGGGAAAGCAAATGGGCGGAGACGGCGTCTTACCAGCGAATCTCGCCGGAATGACAAAAAG
TCAGCTCTACGGTATCATGTCTCAAATGAAGGCGCTGATTGATCAAAACCATGAACAAGCGAGAGAGATTCTGATTCAGAATCCTG
TTTTGACCAAGGCTCTTTTCCAGGCACAAATCATGCTCGGAATGGTTCAGCCTCCTCAAGTGGTGGTTCCCAAAGTTGAGCCTCAA
GTCGCTCCACAACCACCAAAGCCAAGCGTTCAAGCTCATATGTCTTCTCTTCAAGGCGGTATGGGGTTGCAAGAGCCAGCTGCTCA
GCCAAAAGCCCCGATTAGGAAACACACACTGCAACAGCCAATGCCTATGCCTCCTCCTCCTCCTCCTCTACCTTCTGTTTCTGCAA
CCAATAATGCTCCGTCGCAGCAGCCTCGTTTCTCACATCCCCAGCGTCCGAATCCTGCTGGCACTTCTCTGTCTCATCCACAGTCT
TCTCAAGTCCAAAACGCGCCTCCCCCGGTTCCTCATCATCATCCAACATCCCAACCACAGTCTTTTCATCATCTTGATATACCAGC
CTCCTCGACTCAGTTGCAGCAACCACAACAGCAACCAATGCACTGGGTTGGGAGTCCTCGTTTACCTCAGCATCAGCCTAGACCAT
ATCATCATCAGTTTGGACCATCCCAGACTGGTCCCAACGCTGGGTTTCAGCACCATGGCGCACCTCCTCAGCATCATTCTCAACCC
AATTTTCATTCTGGCAACAGACTCCCAGCTTCTGGTGGACCTCAATTCCCTCAGGGACAGTCACATCTCGTTAGCCATCCACCATA
TCAGGGTGGAGGTCAATTTCGTGGAGACTACAATAATAACCAATTAGGAGGTCCGACGGCTGCAGATAGAGGTCCTTCTTGGATGG
CTGGCCAATCAGAGAGCTCAAGCATTACTTATTTCCCAGGATTAGGACCGGTGCCTCCACCAAGCCAAGCTGGAGCTGGAGGTGGC
CCATCACCTCGCCCTGCTCCGATATCTGCAGAGATGGAGAAGCATTGCTTCAACAAGTGATGAGCCTGACCCCAGAGCAGATCAAT
TTGCTGCCACAGACAGAGAACCAAGTCCTTCAGCTCCAACAGATTTTCCGACAGTGAAGTTCATCGACACAATCGCTTGGTCTCCA
TGTTATAGCTTAGAAGAGACATGCTTGGGGTTTGAATGTAAGGTCCGAGTCGAGTTTGCGATCATTTGTAGAAAAGGAAAAGAAGT
AGCTAATATATTTTTTATGTATCACTGAATGCTTTTGGTCAATAGACCGTGGAGAAAACTATGTGTTTTTCACTTTGATGTTTTAT
GTTCGGTGACAACTTTTTTCTGACTTTCAAAGTTTCCAAGTCTTGTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34537 unnamed protein product [Thellungiella halophila]14522e-158
XP_002888949 hypothetical protein ARALYDRAFT_476521 [Arabidopsis lyrata subsp. lyrata]13813e-150
NP_177525 hydroxyproline-rich glycoprotein-like protein [Arabidopsis thaliana]13795e-150
AAG52077 putative proline-rich protein precursor; 93710-91881 [Arabidopsis thaliana]11261e-120
XP_002318548 predicted protein [Populus trichocarpa]6635e-067

Swiss-Prot top hits (Blast detail)Scoree value
Q75JC9 Uncharacterized protein DDB_G02716701902e-013

TrEMBL top hits (Blast detail)Scoree value
Q8VYM7 Putative proline-rich protein13793e-150
Q9C9S8 Putative proline-rich protein; 93710-9188111268e-121
B9I2L7 Predicted protein6634e-067
C6T790 Putative uncharacterized protein5569e-055
Q0DGT3 Os05g0513300 protein3695e-033

Arabidopsis top hits (Blast detail)Scoree value
AT1G73840.1 ESP1 (ENHANCED SILENCING PHENOTYPE 1)13792e-152
AT4G13340.1 leucine-rich repeat family protein / extensin family protein1425e-009
AT1G61080.1 proline-rich family protein1353e-008
AT1G31810.1 actin binding1264e-007
AT3G19430.1 late embryogenesis abundant protein-related / LEA protein-related1264e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  50%
 
112  50%

Unigene MembersMember information