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Information for unigene UN19067
| FASTA Sequence |
| Unigene ID: UN19067 | Length: 1537 |
SSR | | GGGGAGAGTGGCCTCTCTCTCTCTCTACCCTAAAACACACTCACCCACTTCCTCCTCCTCTTCCATAATCCTCTCTCTTCTCTCTC
TCTCCTGCCATGAAAATCGCAGACACAAACTCCTCCCATCTTGATGACTTCTGTGTCTTCCTGAGTTTTGTCCGAACGCTCTGAAA
ACTTTACTTGTGAGACCCCAAAAAATAAGCGGATATTTATAGAAAACTCATAAACAAAAAAGATCAAACCCCATGGCTGAGAATCT
CACTTGTGGAGAAACCAGCGATTCATGGATCACTGATGATGACGTCAGCTGTGGCGGCGGCGGATTCATGAACGATGAACTTTTTA
GTAAAGACCATAACTTTAACGTCAACGGATCAAACCCGATGATGATAGGAGAAGAGAGGATCAGAGAGATGCTGGAGCGAGAGGTT
GAGTTCTTGCCAGGAGCTGATTACCTCAAGAGGCTGCGTTCTGGGGACTGGGAGCTGCGTGTTAGGAACCAAGCTCTGGATTGGAT
TCTAAAGGTTTGTGCTCATTACAGTTTTGGAACACTCTGCATTTGTCTGTCCATGAACTACTTGGATCGGTTCTTAACATCCTATG
AACTGCCAAGAGACAAGACATGGGCTGTTCAGTTGCTAGCTGTCTCTTGCCTATCATTAGCAGCTAAAATGGAAGAATCAGATGTG
CCTCAAACAGTTGAGTTACAGGTGGGAGATCCCGAGTTTGTTTTTGAGGCCAAAACGGTTAAAAGGATGGAACTTTTGGTACTCAA
CACTTTGAATTGGAGACTGCAAGCCCTAACTCCATTCTCCTTCATTGATCATTTCATTTACAAGACCAACGGTCACGTGTCAGAGA
ATTTGATCTATAGGTCATCACAGTTCATCTTGAACACCACTAAAGCAATTGAATTCTTGGACTTCAGGCCTTCTGAGATAGCTGCA
GCAGCGGCAGCGTCTGTTGCCATTTCAGGAGAAGTAAATTGCATTGATGATGAAAAGACAATGTCTAATGTCACATATGTTAAACA
GGAGAGAGTGAAGGTATGTTTAAATTTGATGAGAGACCTCGCAGGGGAGGATGTGACGGGTGCTACATTGTCGCCACAGCAGCCGA
GATTAGTGGTAAGAGTGGTACCGGTGAGTCCAATTGGTGTGTTGGAAGCAACATGTTTGAGCTATAAGAGTGATGAGAGAACAGTT
GAGTCATGTACAAGTTCCTCACAGAGTAGTCCGGATACCAACAACAACAACAATAGCAACAAGAGGAGGAGAAAACAATGAGAGAG
AAATAAAGAGTCATGACATTGCTTTTTCCAACACCAATCCATAAGGGTCATTACATTTGCGGTTCTTTATATTTTTGGTTTATTCC
TCTTTTTTTTTAAACTTAAATTTCTTTACTTTTCTTTGGTTTCTCATCTTCAACCGGAGTTTTGTGAGAGAAAATAAAAATAAAAA
AATAAACAGGGATCTTTTGAAGGCGGCAAAATTAATAGTCATTGTTATTGGAGATGATGAGAGACATCCCTATGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002880446 CYCD2_1 [Arabidopsis lyrata subsp. lyrata] | 1390 | 3e-151 |
| NP_179835 cyclin-D2-1 [Arabidopsis thaliana] | 1263 | 2e-136 |
| S51651 cyclin delta-2 - Arabidopsis thaliana | 1259 | 5e-136 |
| BAF00198 putative cyclin D [Arabidopsis thaliana] | 1257 | 8e-136 |
| NP_001189576 cyclin-D2-1 [Arabidopsis thaliana] | 1251 | 4e-135 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SXI2 Cyclin d, putative | 805 | 1e-083 |
| Q9ZRX9 Cyclin D2.1 protein | 784 | 4e-081 |
| B9RJU5 Cyclin d, putative | 734 | 2e-075 |
| Q8L6U0 Cyclin D2 | 710 | 1e-072 |
| C6THY5 Putative uncharacterized protein | 669 | 8e-068 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G22490.1 CYCD2;1 (Cyclin D2;1); cyclin-dependent protein kinase regulator/ protein binding | 1342 | 4e-148 |
| AT5G10440.1 CYCD4;2 (cyclin d4;2); cyclin-dependent protein kinase | 597 | 1e-061 |
| AT5G65420.1 CYCD4;1 (CYCLIN D4;1); cyclin-dependent protein kinase regulator | 593 | 3e-061 |
| AT1G70210.1 CYCD1;1 (CYCLIN D1;1); cyclin-dependent protein kinase regulator | 451 | 8e-045 |
| AT3G50070.1 CYCD3;3 (CYCLIN D3;3); cyclin-dependent protein kinase | 430 | 2e-042 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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