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Information for unigene UN19079

FASTA Sequence
Unigene ID: UN19079Length: 672  SNP
GGGTTCGTTCATATATTCCACCATTGTCTAGTTCGTGAGGCTTGAGATTCCATTTTAGGAGATCAAATCGAAATGACAACAGTACC
AGGACAGTTGGTGTGGGAGATAGTGAAGAGAAACAACTGTTTCTTGGTCAAACAGTTCGGTAGAGGCAATGCCAAGGTTCAGTTCA
GCAAGGAGACCAACAACCTCTGCAACCTCAACTCCTACAAACACTCTGGTTTGGCGAACAAAAAGACAGTGACCATTCAAGTAGCT
GACAAGGAGCAAGGTGTGGTACTCGGAACCACAAAGACCAAGAAGCAAAACAAGCCTAAGCTCTCTGTTAACAAGTCTGTCCTCAA
GAAGGAGTTCCCCAGGATGGCCAAAGCTGTTGCCAACCAGGTTGTGGACAACTACTACAGGCCTGATCTGAAGAAGGCAGCACTTG
CTAGGCTCAGCGTGATCAGCAAAGGTCTTAGAGTCGCCAAGTCTGGTCCCAAGAGAAGAAACAGACAGGCCTGAAGAAAAATCGCC
ATTGAATGAAATATTTTACTTCTTATAAAGCTTGTTTTGAGAGCTTCAGACAATGCTTTTGCAGGTTTAATGATTCTCCTGAACAG
CTGAGAGTTTTGTTTGAACGACCTCCTTTGTCATCCTTTTTTCGCAAAATGATATAAAAAATTATTTAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002867410 60S ribosomal protein L28 [Arabidopsis lyrata subsp. lyrata]6901e-070
NP_194670 60S ribosomal protein L28-2 [Arabidopsis thaliana]6675e-068
ACF23027 ST45-109 [Eutrema halophilum]6675e-068
NP_179563 60S ribosomal protein L28-1 [Arabidopsis thaliana]6551e-066
XP_002886025 60S ribosomal protein L28 [Arabidopsis lyrata subsp. lyrata]6532e-066

Swiss-Prot top hits (Blast detail)Scoree value
Q9M0E2 60S ribosomal protein L28-26673e-069
O82204 60S ribosomal protein L28-16556e-068
Q962T2 60S ribosomal protein L281986e-015
Q3T0L7 60S ribosomal protein L281701e-011
P46779 60S ribosomal protein L281682e-011

TrEMBL top hits (Blast detail)Scoree value
B4YYB0 ST45-1096674e-068
B9MST4 Putative ribosomal protein L285742e-057
A9P9G9 Predicted protein5707e-057
A9P8K5 Predicted protein5634e-056
B9RKC5 60S ribosomal protein L28, putative5617e-056

Arabidopsis top hits (Blast detail)Scoree value
AT4G29410.1 60S ribosomal protein L28 (RPL28C)6682e-070
AT4G29410.2 60S ribosomal protein L28 (RPL28C)6682e-070
AT2G19730.1 60S ribosomal protein L28 (RPL28A)6565e-069
AT2G19730.2 60S ribosomal protein L28 (RPL28A)6565e-069
AT2G19730.3 60S ribosomal protein L28 (RPL28A)6565e-069

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  29%
 
81  14%
 
113  43%
 
121  14%

Unigene MembersMember information