Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN19083

FASTA Sequence
Unigene ID: UN19083Length: 1422 SSR 
GGAACACTAGATCGGAATTTCACGCAGAGAAACACATTCTCTCTCGGTTCGGAAACGCATCCCATCTCTCTCTCTCTCCGGTTGTA
TTCCAGCTGCATCGACCAAATCTCAGTAAACTTACCAAAGAAATAACCTCTCATCATCCAAACATGTTCAAGAAGTTTTCAATGGA
GGAGGTTTCATCGCAAAACCAAGTAAAGGCTTCTGTCCAACGTAGGATTCGCCAGAGTATTCAAGAAGAGTACCCGGGACTTGAAA
CGGTGTTGGAGGATCTACTTCCCAAAAAGTCTCCTCTCATTGTAGTCAAGTGCCCAAACCATCTGACGCTAGTTGTTGTCAACAAT
GTCCCCCTCTTCTTCTGTATCCGTGATGGGCCATACATGCCAACTCTGCGTCTTCTTCATCAGTACCCAAATATAATGAAGAGGTT
TCAAGTTGATAGAGGTGCCATAAAGTTTGTTTTCTCTGGTGCAAACATAATGTGTCCTGGTCTCACATCCCCTGGAGGCGTTCTCG
ATGAAGAAGTTGAGGCAGAAAGGCCTGTGGCTATATATGCAGAAGGAAAGCAGCATGCCTTAGCAATAGGCTTCACCAAAATGTCA
GCCAAGGACATTAAGAGCATCAATAAAGGAATCGGAGTGGACAACATGCACTACCTCAACGACGGTCTCTGGAAGATGGAACGACT
AGATTGAGGAACGAAGTCCAATGTCGTGTGAATCACTCTGGAGGAGATCTCCTTTTTTATGTGTCTCTAAACTTTTATGGAGCGTT
TGTCCGGATCTCAATCGTGGCTTCTGTTTTTTCAAAATATTTGATGTTTTGTTTTTACGAGAGAACATCAACCTTTAGCTAAGGTT
ATACAGTTTCCAAATATTTTGCTAGCTCCGTATTAACCATGGCTTTAATTAACGTCTTTTAAACATATCAAGTTATTGAAGAAACA
GTACAAGTATTATGATGACTCATAAGTAGGAGTCTAGTGTGGCTAGTGCCTACTAATTAGTTATTAGCGGTGTTGTACAAAAGTAC
TAACATTCAATGTGATTGCACATCATGACAACATTTTATTTTACTTAATTTTCTCATCGTACCATTTTCCAAACTAAACTAAAAAC
AATTAACCAACTTAACCCAAATATTTGGCACTCGTCTTAAACTCAGCAGCTCACTTTTTGAGGTTTTGGCCTGACCTCAATCCCAT
CAATTACAATCCCACCCTTCAGCTGATACCCTTTCACTTCGGTTAGACTCATCACAACCTCCTTGTCCTCCTCACCTTCTGGTCCT
GTCTCGAACTCTCCTAGCTCTATCTCCATCCATCCGTCTTCTCGCATCTCCGGCTCCCTCCGTCGAGATCCGACAATCAAGTCCTT
CTTGCCCAACCTCTTCATTTGTTGTTTCTTGCCATCCAAGCAACTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_172387 pseudouridine synthase and archaeosine transglycosylase domain-containing protein [Arabidopsis thaliana]9073e-095
XP_002889734 pseudouridine synthase and archaeosine transglycosylase domain-containing protein [Arabidopsis lyrata subsp. lyrata]9038e-095
XP_002319503 predicted protein [Populus trichocarpa]8437e-088
XP_002330175 predicted protein [Populus trichocarpa]8392e-087
AAV80392 MLL [Hordeum vulgare subsp. vulgare]8275e-086

Swiss-Prot top hits (Blast detail)Scoree value
Q86KL4 Malignant T cell-amplified sequence 1 homolog5181e-051
Q5PPY1 Malignant T cell-amplified sequence 1-A5111e-050
Q9DB27 Malignant T cell-amplified sequence 15111e-050
Q2KIE4 Malignant T cell-amplified sequence 15101e-050
Q9ULC4 Malignant T cell-amplified sequence 15101e-050

TrEMBL top hits (Blast detail)Scoree value
Q8L7N2 Putative uncharacterized protein At1g091509072e-095
A9PAN0 Predicted protein8435e-088
A9PCQ5 Predicted protein8391e-087
B8Y453 MCT-18274e-086
Q4QXS6 MCT-18274e-086

Arabidopsis top hits (Blast detail)Scoree value
AT1G09150.1 pseudouridine synthase and archaeosine transglycosylase (PUA) domain-containing protein9088e-098
AT1G09155.1 AtPP2-B15 (Phloem protein 2-B15); carbohydrate binding2842e-025
AT1G56250.1 AtPP2-B14 (Phloem protein 2-B14); carbohydrate binding2277e-019
AT1G56240.1 AtPP2-B13 (Phloem protein 2-B13); carbohydrate binding2251e-018
AT5G24560.1 AtPP2-B12 (Phloem protein 2-B12); carbohydrate binding1425e-009

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
1210  77%
 
72  15%
 
111  8%

Unigene MembersMember information