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Information for unigene UN19133
| FASTA Sequence |
| Unigene ID: UN19133 | Length: 1403 |
| SNP | GGGAGAATAATGGCTTCTCTCGTCTCTTCTCCTCATGCCTTGACTCTTCCCTTCTCCTCTCCTCACCGTCTCCATCACACCCCTCC
CAATCTCTCCACTCTCCGTTTCTCCCGACCAATCAAAAACAACTCCCTCCGATGCTCCGTCTCGATCGAGAAAGAAGTCCCCGAAA
CCGAACGACCCTTCACTTTCCTCAGAGACTCCGACGATTCCTCCACTCACTCTTCTTCTCCAACTTCGGTCAGAGCTCGTTTCGAG
ACCATGATTAGAGCGGCGCAGGACAACGTCTGCGAGGCCATCGAAGCCGTAGAAGGCGGTCCGAAGTTCAGAGAAGACGTCTGGTC
TCGACCAGGCGGAGGAGGCGGGATCAGCAGAGTTCTGCAGGACGGGAACGTGTTCGAGAAAGCTGGGGTTAACGTCTCTGTGGTTT
ACGGTGTGATGCCTCCCGAGGCGTACAGAGCAGCTAAAGGGCTCTGCTTCTTCGGATCAGAAGCCTGGTCCGGTTCCGTTCTTCGC
AGCTGGGGTTAGCTCGGTTTTGCATCCCAAGAACCCTTTCGCTCCGACTCTGCATTTTAACTATCGTTATTTCGAGACTGATGCTC
CCAAGGATGTTCCTGGAGCTCCGAGGCAGTGGTGGTTCGGTGGTGGAACTGATTTCACACCAGCTTACATCTTCGAAGACGATGTC
AAGCATTTCCATTCGATTCAAAAGCAAGCGTGTGACAAGTTTGACCCTTCCTTCTATCCACGATTCAAGAAGTGGTGCGATGACTA
CTTTTACATCAAGCACCGTGATGAGAGACGAGGACTTGGAGGGATATTTTTTGACGATCTTAATGACTATGATCAGGAAATGCTTC
TTGCATTCTCCACTGAATGTGCGAACTCAGTGGTACCGGCTTATATACCTATAGTAGAGAAGAGGAAAGACATGGAGTTTACAGAG
CAGCACAAGGCATGGCAGCAGCTGCGGCGAGGAAGATATGTCGAATTCAACTTGGTATATGATCGTGGAACGACATTTGGTCTGAA
GACAGGAGGGAGAATAGAGAGTATTCTTGTCTCTCTTCCACTGTCAGCAAGATGGGAATATGACCATAAACCGGAAGAGGGGACGG
AAGAGTGGAAGCTGTTGGATGCTTGTATCAACCCCAAGGAGTGGATATAGCCCACGCTTTCTGTTGAGACTGAGTTGATGTTGTTT
CTATTGTTTCTTGTTTGTTTAGTTGGATTAGATTATTCAAGAGATGAAGGAAATGGATTTTGTAAGGTTGATGTGCATGTTGTTAT
AAAAACGCTGAGTGGCTACCAAGACAAACTTAGGTGATGTGCATGTTACCAATGCTGTATTTTCACAACTGACATGTTTATTGTCT
ACAGGCTCCCATCCAGTTCAACTCGTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_171847 Coproporphyrinogen III oxidase [Arabidopsis thaliana] | 1275 | 6e-138 |
| AAK53008 At1g03480/F21B7_24 [Arabidopsis thaliana] | 1275 | 6e-138 |
| XP_002892163 coproporphyrinogen III oxidase [Arabidopsis lyrata subsp. lyrata] | 1275 | 6e-138 |
| XP_002874876 coproporphyrinogen III oxidase [Arabidopsis lyrata subsp. lyrata] | 1235 | 3e-133 |
| XP_002518396 coproporphyrinogen III oxidase, putative [Ricinus communis] | 1225 | 4e-132 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LR75 Coproporphyrinogen-III oxidase, chloroplastic | 1275 | 2e-139 |
| Q42946 Coproporphyrinogen-III oxidase, chloroplastic | 1199 | 2e-130 |
| P35055 Coproporphyrinogen-III oxidase, chloroplastic | 1197 | 3e-130 |
| Q7XPL2 Coproporphyrinogen-III oxidase, chloroplastic | 1172 | 2e-127 |
| Q42840 Coproporphyrinogen-III oxidase, chloroplastic | 1159 | 7e-126 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RXC7 Coproporphyrinogen III oxidase, putative | 1225 | 2e-132 |
| B9HZJ8 Predicted protein | 1207 | 3e-130 |
| A5BF85 Putative uncharacterized protein | 1200 | 2e-129 |
| C5YFN1 Putative uncharacterized protein Sb06g028140 | 1184 | 1e-127 |
| Q2F7H7 Coproporphyrinogen III oxidase | 1176 | 1e-126 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G03475.1 LIN2 (LESION INITIATION 2); coproporphyrinogen oxidase | 1276 | 2e-140 |
| AT4G03205.1 coproporphyrinogen III oxidase, putative / coproporphyrinogenase, putative / coprogen oxidase, putative | 516 | 2e-052 |
| AT4G03205.2 coproporphyrinogen III oxidase, putative / coproporphyrinogenase, putative / coprogen oxidase, putative | 516 | 2e-052 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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