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Information for unigene UN19134

FASTA Sequence
Unigene ID: UN19134Length: 1064  SNP
CAATCTATATAAGGACAACTAACCATTCACCACCATCCCCCAAATCAATGCGTAGGGTTATTAGAGAAATCATATAAACCGAAAAA
CAAGTCTTTGTGATGGACAAACAAAACGAAAACTGAGACACATTATTAATTTGTAAAAAATAACATAACAAATCAAAAACCAAAAA
AAGAAGTGATTAGTACAGAGAGTCGATGCTCCAAGTGGGGCTTTGAGTTTCATTATATGCTCCTATTCCTGTTTCTATTTTTAGCC
TCACCACCTCTTGTTCTTCTTCATCCGCCTCAATAAAGAGAGTGTAGAAGATCATGCCAGAAAAAAAGTTGAGATTGGAAGTGAGG
ATTTTGAGATTCAATGACTCAAAGACTTCACAAAGTTTAACCATTGTGTCTGTCCTCTTATTACATGTTACATTCACCACCATTAC
CCTATCTCCCATGGATGTTACCTTCAGTTCGATAACTTCGATGAGAGAACGAGAAGAACCAGAATCAAGCTGTTTCATCTTCTTGG
ACGTGACAGGAACCAGTAAATCACGATCAAAATCTTTACTGAAACTCAAACTACTCTTGGGTGTAGATTCAAGTTCTCTGATCTCA
GCTTCGAGCTTCGCTTCTTCATATTGTAACCCTTGTATGTAACTAATAGCATCTTTGATTATTGATGCTTTATCCATCTTAGTGAT
ATTAGGAACAACTGATCGAAGAGCGAAGAGTCTCTGGTTAAGTTTCTGTCTTCGGTTTCTCTCCGATACAATATTCTTAGAAGCCG
GCGACGAAGCCGCCCCATCAGGCGAGCTCGAATCATACGACCCAGAAATAGCTTCCTCCAAAGGCCAGCTGTCGTATTCGAAGTCT
TCGTTTTGGAGGAAGGAGTTGTGCTCCCAGTAATTGTTGAATTCTTGGTCGATATTCTCCATTTTTTTCCGACAGATCTCTTTTGT
AATCAAACTGTATGATCGTCTATGTAGTGTGTCTCCTTGTCTCTCTCGACCTGTGAGCTTTATATAGAGAAGGCCAATGAGAGAGT
GAGAATGAGACAGAGAACCAAAGTCTCGGGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002864502 basic helix-loop-helix family protein [Arabidopsis lyrata subsp. lyrata]11284e-121
NP_568850 transcription factor bHLH35 [Arabidopsis thaliana]11267e-121
Q2HIV9 RecName: Full=Transcription factor bHLH35; AltName: Full=Basic helix-loop-helix protein 35; Short=AtbHLH35; Short=bHLH 35; AltName: Full=Transcription factor EN 41; AltName: Full=bHLH transcription factor bHLH03511142e-119
AAM63723 unknown [Arabidopsis thaliana]11114e-119
NP_974948 transcription factor bHLH35 [Arabidopsis thaliana]9555e-101

Swiss-Prot top hits (Blast detail)Scoree value
Q2HIV9 Transcription factor bHLH3511148e-121
Q700E3 Transcription factor bHLH274274e-041
Q0V7X4 Transcription factor FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR2097e-016
Q9FIP9 Transcription factor ATR22024e-015
Q9LPW3 Transcription factor SCREAM21953e-014

TrEMBL top hits (Blast detail)Scoree value
Q8LCD1 Putative uncharacterized protein11113e-119
C6TGE0 Putative uncharacterized protein6803e-069
B9HAY6 Predicted protein6722e-068
A5B8T8 Putative uncharacterized protein (Fragment)6256e-063
B9RWY6 DNA binding protein, putative5442e-053

Arabidopsis top hits (Blast detail)Scoree value
AT5G57150.1 basic helix-loop-helix (bHLH) family protein11272e-123
AT5G57150.3 basic helix-loop-helix (bHLH) family protein9552e-103
AT5G57150.2 basic helix-loop-helix (bHLH) family protein9552e-103
AT4G29930.1 basic helix-loop-helix (bHLH) family protein4273e-042
AT4G29930.3 basic helix-loop-helix (bHLH) family protein4273e-042

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
123  27%
 
74  36%
 
82  18%
 
112  18%

Unigene MembersMember information