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Information for unigene UN19140

FASTA Sequence
Unigene ID: UN19140Length: 832 SSR 
GGAATCTCTTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCATCATCACAGAGGCGTAAATGGCGGCTTCGTTCTCACTCAC
GAGCTTCATCTCCTTCATCTCCCCATTCAAATCCCACACCAAACCAACCCCGCCTCCAAACCTCACTCTCCCCACTCCAACAGTCT
CCCACAGACGTAGAAACGATCTCGCCGTCGAAACAAAGGCCGTGGACGCTGACGAGCCTCCTTCTTCCAACGCTTCTCTCTCCTCC
GAGCTCGCCTCAGTGATATGCCCGTCGCTCGCTTACTCGAACACGCTCCTCTTCAGCAGCTCGGGGTACAACGTGCAGGTGTTCGT
GGAGGACAACGAGTCTGAGGAGAGGCTGGTGAATCGGTTCAGAAGGGAGGTGATGAGGACGGGGGTCATACAGGAATGCAAGAGGA
GGAGGTACTTTGAGAACAAGCAGGACGAGAAGAAGCGGAGGACTCGCGATGCTGCTAAGCGTAACAAGAAAAGGCGTCCTTTTGCA
AAGTTTACTCAAGAGACCAGAGAAGAAGCAGCAGCGGCAGCAACCAAGGGTAAGAAGAAGGATGAACAAGAAGATAACTGGGACTG
GGAGATGCCTGGTGGAGATGTACCTTCTTGAACCACGGTTTCAGTACATAGATCTCCCCTTCCTTTTCTGTCTATTTTGATTACTC
GGTGACATTGTATGTTCAAATTGCGTGTAACTTGCCTCTCTGGTAATGAGTTCTTGTCAATGTTAAAGACTTCTTTTTATTATGAC
TAAAAATTTCATGTCAATTTGGTTCGGTGTTTTCTCATATATGCAGATTGTTTATCTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002875359 hypothetical protein ARALYDRAFT_484499 [Arabidopsis lyrata subsp. lyrata]8058e-084
NP_566809 ribosomal protein S21 family protein [Arabidopsis thaliana]7861e-081
AAK64005 AT3g27160/MYF5_3 [Arabidopsis thaliana]7824e-081
XP_002268728 PREDICTED: hypothetical protein [Vitis vinifera]4662e-044
CAN82190 hypothetical protein VITISV_031115 [Vitis vinifera]4572e-043

Swiss-Prot top hits (Blast detail)Scoree value
P82024 30S ribosomal protein S21, chloroplastic (Fragment)1396e-008
B2UNE2 30S ribosomal protein S211262e-006

TrEMBL top hits (Blast detail)Scoree value
Q9LI88 Genomic DNA, chromosome 3, P1 clone:MYF57869e-082
Q94BT7 AT3g27160/MYF5_37823e-081
A5AI30 Putative uncharacterized protein4571e-043
Q8VWX5 Ribosome-like protein (Fragment)4274e-040
A9PGV4 Predicted protein4175e-039

Arabidopsis top hits (Blast detail)Scoree value
AT3G27160.1 GHS1 (GLUCOSE HYPERSENSITIVE 1); structural constituent of ribosome8027e-086
AT5G63300.1 structural constituent of ribosome2571e-022
AT5G63300.2 structural constituent of ribosome2159e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
64  80%
 
121  20%

Unigene MembersMember information