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Information for unigene UN19144
| FASTA Sequence |
| Unigene ID: UN19144 | Length: 1930 |
SSR | | GCAGGTATCAAAGCAGAGAAAATGAATGAACAAAGACAGTCTCAAGAACGTGGGAACATAGACAACAATGTAGCAACAACAACAAA
AAAAAAACAATTAACAAGAAGATCTTACAGGAAACAAAAAAAAATATTATAATAATAATAATGGGAACTTGGAAGAAGAAGAAGAA
GAGACCCAAATATTGAAACTTTTCTCCTGAATTGATGATATCACAATTCTCTATATAGCTCTAAACCCTCATTTACCCTTTTCGCA
TTCCAACTTCTTCCAACCGTTTCCAAGTGGCTTCACGTTTGGCCTTGGTCTCACCTTCCTTTGATTCGTCTTCTTTGAACTTAGCA
AGGCATTCCTTGAACAGCTCAGGGTCCAGGTCTTGGAATATCTTCCTCACGTTTAGCGTCAAGCTATGAACAGCTTGGTTCCAATG
TTTCTGTGCGTTTCTTTCCAACGCAGGGAATATAATTGGGAGAATGACTTTGCGGCTCTGCATTATCAGATTCTCTATGTGATTGT
TGTTCCATAAGAATAAAGCTCTCTCTGCCACCTGAAAATGCAGGCTGTTCAAACACCGAGCTATCTGGCGAAAGAGCGGCACCATA
CACCGTTGGAACTCCGGAGGCTGTGTCGCTTCAAGCACTTCCTCCAACTCATTCAAAAACATGACTTCTTTGGAACTATTCGTCAC
GGGCCAGTACTTGAGCAACCCTCTTATAACCGTATCAGCGAGTTTGCAATCCTTCTCCACAAACTGCGTGATGCAATAAGACAACT
GCTGGTGATACATCTGCAAGCACTTGGGTTTGTGGAGCGGTATCAAAACCCGAACCAGAAACACTTTGTGCTCTTCTTTCAAAGGA
AGAGCGAAACCGTTGATTATACTTCCCAAGATCTCGAGGAACTCGGCGATCCCGTTGTGTTTCTCTGTCTCGAAGACGAACCTGTA
GAAGATGTTGTTTATCGACTTCCTGATGAAAGGACGGTGGACCATGAATTTGCCGTAGATCCGGTGGAGGATTGTTTTGAGGCAGT
CTCTCTCTCTAGGATCCTCTGAATCAAACAAGTCTAGTAGCCTCAGGACGAAGGATTGGTCTATGTATCTTTTGGCCAGTTTGGTG
TCGGTCTCAGGGGAAGCAACGAACCTCAGGAAAAGCTCGTAGACGAGCTGCAAGTGAGGCCAGGCGAGATCCATCGAAGGCTCTTC
CTCCTCGAGGTCTAAAGCGTCGATGACTTTGTTCTCGCGTGGCTGTGGGTTTAGCGTTCTGAAGATGTTTGCTGAGACCATGCGCA
CGACTTCTTGGACGCTACCTTCGCTGAACTTCCCGTTCGCGGAGTTCACGTAGTCCACGAGCTCGAGTAAGGTTTGTCTCTTGATG
TCTTTCTCCTTGATGTTCTTTGTGGGATCAGTGAAGTCGAAGACTACGCGGCAGAGGTTAAGCTTCTTTATGAAGAGGGTTTGCTT
TTCGGTGTTGGGGACGTCTTTGAAACTTGGTAATGCTTCGTAAGGAGTGAAGACTCCTCCATTGTTGTTGTTGTTGTTGCTCTTTG
GATTAGCATCAGAGGAGGAGGCAACAGGAGGAGCGCTCTTTGTCTGTGAATGCTTTGTTTTCCCGACGCCATTGTTGTCACTGCTT
TTGGAAGTGGAGGCGTGAGATGAAGATGAAGAAGAAGAAGAAGAAGAATGGGCACCGTGTTCACGTCCTCCTCCACGATGATGATG
GTGGTGTTCGTTCTTTGAAGACTTTTTGTTGTTGGGAAGCTTACTTAGAATCTGTTTCCACATCCTTTAACACCAACCACAACTTA
GATTCTCTTCATCATCTGGAAAAAAAAAATCGAGAAATTTTTTTTATCTTCTTCTTCGTTTAACGCAGAACAAATCCAGATGAGAA
AGAAGAAAAAGCGATTACAACGATGACGATGATGATGA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_189231 protein phosphatase 2A regulatory subunit B' eta [Arabidopsis thaliana] | 2315 | 2e-258 |
| XP_002875297 hypothetical protein ARALYDRAFT_904782 [Arabidopsis lyrata subsp. lyrata] | 2288 | 3e-255 |
| AAM61625 B regulatory subunit of protein phosphatase 2A, putative [Arabidopsis thaliana] | 2128 | 1e-236 |
| NP_172803 protein phosphatase 2 (formerly 2A), regulatory subunit B' [Arabidopsis thaliana] | 2118 | 2e-235 |
| XP_002890006 hypothetical protein ARALYDRAFT_471504 [Arabidopsis lyrata subsp. lyrata] | 2116 | 3e-235 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LU89 Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' eta isoform | 2315 | 9e-260 |
| Q8LF36 Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform | 2118 | 6e-237 |
| Q8RW96 Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform | 1701 | 1e-188 |
| Q9LVE2 Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' zeta isoform | 1685 | 1e-186 |
| O04376 Serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform | 1558 | 6e-172 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DH07 AT3G26020 protein | 2315 | 2e-258 |
| Q0V836 At1g13460 | 2118 | 1e-235 |
| B9RMK5 Protein phosphatase 2a, regulatory subunit, putative | 1912 | 8e-212 |
| B9HTC8 Predicted protein | 1893 | 1e-209 |
| B9HTC9 Predicted protein | 1886 | 8e-209 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G26020.1 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | 2315 | 8e-261 |
| AT3G26020.2 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | 2315 | 8e-261 |
| AT1G13460.1 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | 2118 | 6e-238 |
| AT1G13460.2 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | 2118 | 6e-238 |
| AT3G26020.3 serine/threonine protein phosphatase 2A (PP2A) regulatory subunit B', putative | 1745 | 1e-194 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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