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Information for unigene UN19146

FASTA Sequence
Unigene ID: UN19146Length: 818 SSRSNP
GGGCACACTTTTAACTTTCTCCGTTTTCGTCGTCAGAGACATCTCTCTCAATCCCCAAATCTTCGAAGATAGATTCAGATCGGAAA
CGGAAGAAAGACTCTGTCTCTTCGACAGATCAACCAAAGGACAAGAGAGCCGATCACCACCACCACCACCACCAAAGCAAGCACCG
TAAGAAGAGCAAGATGGCGTCGAGAGACCAAGTCAAGGCCTCGCACATTCTGATCAAGCATCAAGGATCTCGCAGGAAGGCGTCGT
GGAAGGATCCGGAAGGTAAGATCATCATGACCACCACCAGAGAAGCAGCCGTCGAACAGCTTAAATCGATCCGTGAAGACATCCTC
TCTGGCAAAACCAACTTCGAGGATGTGGCCACTCGTGTTTCCGACTGTAGCTCTGCTAAACGCGGTGGCGATCTAGGTCCATTTGG
TCGAGGTCAAATGCAGAAGCCGTTTGAGGAAGCAACATATGCACTGAAGGTGGGAGATATAAGCGAGATTGTGGACACAGACAGTG
GAGTCCATATCATAAAAAGAACAGCTTGATCTGTTTATCTCCTTCAAAGCCTCCTATCATGTACCAAAAGATACCAGCTTTTTGAT
TTACCTTCTCTTCTTAACCAAAGATAGAAGATGGATAATAAGATGAAAAAGCTTTGGTTCTGCATCTTTATATGGATTTGATACAA
ACCAAACATATGATAAAGACAAGAAACTGTATCTTAGTTACTTCTCATAATTTCATAATAACGAATTTCTGTTGTGACAGTGACTT
TGTATTATCATCTTTCAGTTTCTGTGTTATCGTCAAGCCTGCTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
1J6Y Chain A, Solution Structure Of Pin1at From Arabidopsis Thaliana6131e-061
BAJ34365 unnamed protein product [Thellungiella halophila]5915e-059
XP_002884105 PIN1AT [Arabidopsis lyrata subsp. lyrata]5843e-058
NP_179395 Peptidyl-prolyl cis-trans isomerase Pin1 [Arabidopsis thaliana]5763e-057
CAM59671 parvulin-type peptidyl-prolyl cis/trans isomerase [Lotus japonicus]5262e-051

Swiss-Prot top hits (Blast detail)Scoree value
Q9SL42 Peptidyl-prolyl cis-trans isomerase Pin15761e-058
Q94G00 Peptidyl-prolyl cis-trans isomerase Pin14919e-049
Q9LEK8 Peptidyl-prolyl cis-trans isomerase Pin14595e-045
P0C1J8 Peptidyl-prolyl cis-trans isomerase pin13001e-026
Q9QUR7 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 12982e-026

TrEMBL top hits (Blast detail)Scoree value
A7DX09 Parvulin-type peptidyl-prolyl cis/trans isomerase5261e-051
B9HFK6 Predicted protein4964e-048
C6SXD9 Putative uncharacterized protein4964e-048
A9NWJ4 Putative uncharacterized protein4571e-043
B9FCZ8 Putative uncharacterized protein4472e-042

Arabidopsis top hits (Blast detail)Scoree value
AT2G18040.1 PIN1AT (PEPTIDYLPROLYL CIS/TRANS ISOMERASE, NIMA-INTERACTING 1); peptidyl-prolyl cis-trans isomerase5779e-060
AT1G26550.1 peptidyl-prolyl cis-trans isomerase PPIC-type family protein1172e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
107  44%
 
127  44%
 
112  13%

Unigene MembersMember information