|
Information for unigene UN19146
FASTA Sequence |
Unigene ID: UN19146 | Length: 818 |
SSR | SNP | GGGCACACTTTTAACTTTCTCCGTTTTCGTCGTCAGAGACATCTCTCTCAATCCCCAAATCTTCGAAGATAGATTCAGATCGGAAA
CGGAAGAAAGACTCTGTCTCTTCGACAGATCAACCAAAGGACAAGAGAGCCGATCACCACCACCACCACCACCAAAGCAAGCACCG
TAAGAAGAGCAAGATGGCGTCGAGAGACCAAGTCAAGGCCTCGCACATTCTGATCAAGCATCAAGGATCTCGCAGGAAGGCGTCGT
GGAAGGATCCGGAAGGTAAGATCATCATGACCACCACCAGAGAAGCAGCCGTCGAACAGCTTAAATCGATCCGTGAAGACATCCTC
TCTGGCAAAACCAACTTCGAGGATGTGGCCACTCGTGTTTCCGACTGTAGCTCTGCTAAACGCGGTGGCGATCTAGGTCCATTTGG
TCGAGGTCAAATGCAGAAGCCGTTTGAGGAAGCAACATATGCACTGAAGGTGGGAGATATAAGCGAGATTGTGGACACAGACAGTG
GAGTCCATATCATAAAAAGAACAGCTTGATCTGTTTATCTCCTTCAAAGCCTCCTATCATGTACCAAAAGATACCAGCTTTTTGAT
TTACCTTCTCTTCTTAACCAAAGATAGAAGATGGATAATAAGATGAAAAAGCTTTGGTTCTGCATCTTTATATGGATTTGATACAA
ACCAAACATATGATAAAGACAAGAAACTGTATCTTAGTTACTTCTCATAATTTCATAATAACGAATTTCTGTTGTGACAGTGACTT
TGTATTATCATCTTTCAGTTTCTGTGTTATCGTCAAGCCTGCTC
|
|
|
GenBank top hits (Blast detail) | Score | e value |
1J6Y Chain A, Solution Structure Of Pin1at From Arabidopsis Thaliana | 613 | 1e-061 |
BAJ34365 unnamed protein product [Thellungiella halophila] | 591 | 5e-059 |
XP_002884105 PIN1AT [Arabidopsis lyrata subsp. lyrata] | 584 | 3e-058 |
NP_179395 Peptidyl-prolyl cis-trans isomerase Pin1 [Arabidopsis thaliana] | 576 | 3e-057 |
CAM59671 parvulin-type peptidyl-prolyl cis/trans isomerase [Lotus japonicus] | 526 | 2e-051 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9SL42 Peptidyl-prolyl cis-trans isomerase Pin1 | 576 | 1e-058 |
Q94G00 Peptidyl-prolyl cis-trans isomerase Pin1 | 491 | 9e-049 |
Q9LEK8 Peptidyl-prolyl cis-trans isomerase Pin1 | 459 | 5e-045 |
P0C1J8 Peptidyl-prolyl cis-trans isomerase pin1 | 300 | 1e-026 |
Q9QUR7 Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 | 298 | 2e-026 |
TrEMBL top hits (Blast detail) | Score | e value |
A7DX09 Parvulin-type peptidyl-prolyl cis/trans isomerase | 526 | 1e-051 |
B9HFK6 Predicted protein | 496 | 4e-048 |
C6SXD9 Putative uncharacterized protein | 496 | 4e-048 |
A9NWJ4 Putative uncharacterized protein | 457 | 1e-043 |
B9FCZ8 Putative uncharacterized protein | 447 | 2e-042 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT2G18040.1 PIN1AT (PEPTIDYLPROLYL CIS/TRANS ISOMERASE, NIMA-INTERACTING 1); peptidyl-prolyl cis-trans isomerase | 577 | 9e-060 |
AT1G26550.1 peptidyl-prolyl cis-trans isomerase PPIC-type family protein | 117 | 2e-006 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|