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Information for unigene UN19148

FASTA Sequence
Unigene ID: UN19148Length: 1289  SNP
CCTATCGCATCGTTTTTTTTTCTTTCTCTAGCTCATCTCATCTCCGCCGCCGGCAAAGACACACCGCATCGTCGGAGAATCCCATT
CGTTGACCTGAGAAAGCTTTCATCAATATGGCAACCATGGCTAGGTCGTTTTTGCAGGCGATATCGAAGGACGAGGCCGTCGCTCC
TCCTCTCAGAGTTGTTCAGATCGAAGGACTGGCTGTGTTAAAGATAATCAAGCATTGCAAGGAGTTTGCACCGACGCTTGTCACGG
GGCAGCTTCTCGGACTTGATGTTGGTAGTGTTCTTGAAGTCACCAATTGTTTTCCTTTCCCCGTGAGAGATGACGATGAAGAGATT
GAAGCTGATGGGGCTAATTATCAGCTTGAGATGATGAGGTGTCTCAGGGAGGTTAATGTTGACAACAACACTGTTGGCTGGTATCA
ATCCACTGTCCTTGGGTCCTACCAGACTGTAGAACTCATTGAGACTTTCATGAATTACCAGGAGAACATCAAGAGGTGTGTTTGCA
TCATCTATGATCCCTCTAAAGCTGACCTAGGCGTCTTAGCTTTGAAGGCTTTGAAGCTTTCAGATTCCTTTATGGACTTGTACCGG
GGCGGAAACTTTACAGGCGACAAGCTGAGAGAGAAAAACTTCTCCTGGATGGATATTTTTGAGGAAATTCCTATTAAGGTTTCAAA
CTCTGCACTTGTCAGTGCCTTCATGACGGAACTGGAGACTGATGCGCCTGTCTCACAGGGTGATTACGATCGTCTGCAGTCATCAA
CCACTCCTTTCCTTGAGAACAATATGGAGTTTCTGATTAAATGCATGGATGATTTATCTATGGAACAGCAAAAGTTCCAATACTAC
TACCGGAACCTGTCTCGCCAGCAAGCGCAGCAGCAAGCCTGGCTCCAGAAGAGGAGGACGGAGAATATGGCGCGTAGGTCAGCTGG
GGAAGAGCCTCTACCCGAGGAGGATCCATCAAACCCAATTTTCAAGCCGATCCCTGAACCATCAAGGCTAGAGAGTTTCCTCATCA
CAAACCAAGTTTCAAACTTCTGTGGCCAAATCAATGGAGTGGCTGGCCAAAACTTCAGCAGGCTCTACCTCACCAAGGCGTTGCAC
GAGAACTGAGTACGAGAAAGTGAGACTTGGTGGTATAACGGATCCTATATTTGTTTTTGCTGGAAGTTTTTCAAGTAGTTTAATAA
CTTTAAATCGTGAAAGATTTACTCTTTTTTTTTATAATACACTTTTTGAAAACAATATTTACAATCACAAGTAATTCATACTAGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892604 TIF3H1 [Arabidopsis lyrata subsp. lyrata]17164e-189
NP_563880 translation initiation factor eIF-3 subunit 3 [Arabidopsis thaliana]17138e-189
AAG53614 eukaryotic initiation factor 3H1 subunit [Arabidopsis thaliana]17102e-188
XP_002266909 PREDICTED: hypothetical protein [Vitis vinifera]15131e-165
ABK92468 unknown [Populus trichocarpa]15122e-165

Swiss-Prot top hits (Blast detail)Scoree value
Q9C5Z2 Eukaryotic translation initiation factor 3 subunit H17134e-190
A7SA47 Eukaryotic translation initiation factor 3 subunit H6945e-072
Q5PPY6 Eukaryotic translation initiation factor 3 subunit H6311e-064
Q6P381 Eukaryotic translation initiation factor 3 subunit H6255e-064
Q6AXJ2 Eukaryotic translation initiation factor 3 subunit H-A6247e-064

TrEMBL top hits (Blast detail)Scoree value
A9P7W5 Putative uncharacterized protein15121e-165
B9IA95 Predicted protein15022e-164
C6TN20 Putative uncharacterized protein14861e-162
A2Q5B8 Mov34-114743e-161
B9GUA1 Predicted protein14709e-161

Arabidopsis top hits (Blast detail)Scoree value
AT1G10840.1 TIF3H1; translation initiation factor17142e-191
AT1G10840.2 TIF3H1; translation initiation factor12789e-141
AT5G23540.1 26S proteasome regulatory subunit, putative1221e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
202  25%
 
122  25%
 
211  13%
 
73  38%

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