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Information for unigene UN19151
| FASTA Sequence |
| Unigene ID: UN19151 | Length: 984 |
SSR | | AATCCAAATAGCACACACACACATAAAACTAGCTTAACATCAAATACAAGAAAGATCAGAAGTAGTCAAAGTTTCTGGGACTCGTT
TTGATCTCCTTTTACAGTCTACATAAAGATAGCTTAGCTATACAAAACCACCAAACATACACTCAAGTATATACAAATACTAGACT
GATAAAAAAACGTCCATAATGGTTTCATTCTAGGGAACCAGTTCAAGGGCTTGATGATGAACTTCCCTCCTTCCTTGGCTCCCTAA
GATAACCCAGTAGTCTTTCTGCCTTGCGTTTAGCTCTAACGCTGACGGCGCCGCTCTGAGAGAGACCCACGAGAGGAGGAATCGCG
CCTTCCCTCACAAGCAACCCACGGTTCCTGACATTATCAGCACAAAGCTGCAACAGCGTCAAGACCGCAAACTCTTTCCCTTTCAC
AGACCCATCCTCGATAGCCTCCACTAGCGCTGCAATCCCTCCTTCCTCCACGATAGCCTCTCTACCTTCCTCCATCGCCGCCAGGC
TGCTCAGAACCACCATCGCCTTCTCCGCCATCCCAGTCCCTTCCTCCGCCACAAGATCCACCAGCGGCTTCACCGCTCCGGCGGTA
ACCGCTCTCTCCTTGTTCTGCTGAAGCGTGCAGAGCTTGTAAAGCGTCGTGAGCGCGTCCTTCTTCCCCCTGCAAGACCCGTTCAG
CAGCAGAGAAACAAGCGGCGGGATCGCGCCGCAAGCTCCGATCGAGTTCTTATTCTCCTCCACTAGCGCGAGGCTGAGCAGCGCGC
ACGCTGCGTTCTGCTTCGAAGTCTCCGTCCCCGTCTTGAGAACCCACACGAGAGACTTGATAGCTCCTCCGGCGGCGATCACAGCT
TTGTTCTGGTCGTGGAGGGAGAGATTCAACAGAGCCGTCACCGCGTGCTCCTGCGTCCACGGATCGTTGCAGCGTAGAAGCGGAAT
CAGCGCCTGAATGGCTCCCGATTCGCCGATCAACACGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002868130 predicted protein [Arabidopsis lyrata subsp. lyrata] | 1214 | 4e-131 |
| NP_567501 armadillo/beta-catenin-like repeat-containing protein [Arabidopsis thaliana] | 1205 | 4e-130 |
| BAC43324 unknown protein [Arabidopsis thaliana] | 1192 | 1e-128 |
| XP_002528228 ubiquitin-protein ligase, putative [Ricinus communis] | 1065 | 8e-114 |
| CAN79837 hypothetical protein VITISV_007520 [Vitis vinifera] | 1018 | 2e-108 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O22193 U-box domain-containing protein 4 | 555 | 5e-056 |
| Q5XEZ8 U-box domain-containing protein 2 | 530 | 4e-053 |
| Q8GWV5 U-box domain-containing protein 3 | 521 | 4e-052 |
| Q8VZ40 U-box domain-containing protein 14 | 494 | 5e-049 |
| Q9SNC6 U-box domain-containing protein 13 | 477 | 5e-047 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8GWN8 Putative uncharacterized protein At4g16490/dl4270c | 1192 | 1e-128 |
| B9SQF9 Ubiquitin-protein ligase, putative | 1065 | 5e-114 |
| A5C9T4 Putative uncharacterized protein | 1018 | 1e-108 |
| B9IH51 Predicted protein | 1005 | 5e-107 |
| B9HCU8 Predicted protein | 1002 | 1e-106 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G16490.1 binding | 1205 | 2e-132 |
| AT3G01400.1 armadillo/beta-catenin repeat family protein | 623 | 5e-065 |
| AT5G58680.1 armadillo/beta-catenin repeat family protein | 591 | 3e-061 |
| AT2G23140.1 binding / ubiquitin-protein ligase | 580 | 5e-060 |
| AT5G67340.1 armadillo/beta-catenin repeat family protein / U-box domain-containing protein | 530 | 3e-054 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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