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Information for unigene UN19159

FASTA Sequence
Unigene ID: UN19159Length: 981  SNP
CAATTCAACTAGTTCCTCTCTTTCTGCAAATTTGCACACCAATTTCATATTTGTGCATAGTCAAAGACATGCTTAAAACCAAGACT
AGCAAAACCAATGTACAAGTGATCCCTCATGAGAGAAACTGCTGGCAAAACATATTATTCTCAAAGAAACAAAAACAAAAACTCTT
AGGGACTTGTAGCAAGCTTGTTGAAGGCGGCGTGAACTCTCTCTTCAGTGAACATTCTGTGGTTCTCATAGAAATCTAATATCTCC
ATTGCGATATTCTTCACAATGTTCATGTCCACAGAGAGCTCTTCAAACCATGTCTTTATGTCTTTCTCTTTGTAAACAGAAGCAAC
GTAAATGCAAGCGAGGGTGATGAGATAAGGCGGGTGTGTAAGGATGAGATCCATTCTGTAAGTGTCGTTGACAATACCCCAAGTTA
AGTGGGTCATACTTGTGTCATTGAGTCCAGAATCCTGCAAGAACTCGGGGAGAGATCGGTAAGGGTGGAAGACAACAAGATAGAAG
TTCAAAGCTTCCAAGATCTTCATCTCCATCTCAAGAATATCTTTAATCTCATACCTGAACTTCTCATCAGCATACAATTTTCTGAT
GTAGAAGACAAGAATCTTGGCATGGACCACACTCTCCTCTGCTTTGCAAGCCAGATACAAGCAGGTGGGAGCAACAAGCCTTGGCT
CATACTCTGTCAAACTCTTCCTTGTGTAAACACGGCGCATATAGGTTATAGCAGTTGCAACAACTCTTTGCCTAATCTTAATGTGT
TGTGCCAGCTTCGATATATAATTAGACATATGAAGCTTAATGAGTCTCAAATCTTCGACAGAGATTCCTCTCTGAGCATCGAGAGG
ATGAACAACATTGATCTCTTCTGGGTCCTTGAGCTCTTTGAAGTGCGTTGATGTCCAGAAATTGGAAGCCATTTTTTTTTTTTTTT
TTTTTTTTTTTGCTTTTCTTTTTCTTCACCCTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_199674 cyclin-C1-2 [Arabidopsis thaliana]12701e-137
XP_002865655 cyclin family protein [Arabidopsis lyrata subsp. lyrata]12557e-136
NP_001190493 cyclin-C1-2 [Arabidopsis thaliana]12153e-131
XP_002301804 predicted protein [Populus trichocarpa]10083e-107
XP_002320618 predicted protein [Populus trichocarpa]10012e-106

Swiss-Prot top hits (Blast detail)Scoree value
Q9FJK7 Cyclin-C1-212706e-139
Q9FJK6 Cyclin-C1-19902e-106
P93411 Cyclin-C1-18682e-092
Q86KE7 Cyclin-C4972e-049
P39947 Cyclin-C4677e-046

TrEMBL top hits (Blast detail)Scoree value
B9GQM4 Predicted protein10082e-107
A9PI29 Predicted protein10011e-106
B7FHU4 Putative uncharacterized protein9851e-104
B7EKR4 (RAP Annotation release2) Cyclin8684e-091
B8BDA4 Putative uncharacterized protein8585e-090

Arabidopsis top hits (Blast detail)Scoree value
AT5G48630.1 cyclin family protein12714e-140
AT5G48640.1 cyclin family protein9901e-107
AT1G35440.1 CYCT1;1 (CYCLIN T1;1); cyclin-dependent protein kinase1925e-015
AT1G27630.1 CYCT1;3 (CYCLIN T 1;3); cyclin-dependent protein kinase1622e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
98  62%
 
122  15%
 
63  23%

Unigene MembersMember information