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Information for unigene UN19167

FASTA Sequence
Unigene ID: UN19167Length: 1207 SSR 
GGGCAAACACACGTGTACTAGGACATAAGATTAGTCAACTTGCTATTCCAGAGTGTGTATTCCTTAAATACCATTTCATGGTTTAG
CTTGAATCTAATCAAACAGTTAAAAACTCATCAACCATTACATGATTTGTTTTGGGGTCTCCATTTTTCAATACACACATTAATAA
CATAACAAGTGTCCAAAAACCGAACTCTCAAACCATGACGGAGGCTTCATCATCATCATCATCATCATCTGTCCCGTCGTCTTGTT
CTTGCCATCCTGAGTGCGCCTTGAATTTACAGACAGGACATGTTCCTTGCTGTCTAAGCCATGGATCGATACAGACTGCATGAAAC
TGATGCAGGCAAGGTAGGGTGCGAACAACCTCCCCAACGGTAACTTGTTCGAGGCAAACACTACAAGTGAGCTCATCTTCCGTTCC
TTTTTTACTCGCACTGACAGAATCTTGCTTCTTCTCCGCTGAGGATGAGGTTGATGCCTGCTTTGTCAAAGAGGAACCATTTTCAG
GATCCAAGACCTTGTACTTGTGTACTGGAAGTGCATTTATCTCTTCCTCGCTCATAGAATTTGTGGGGACATTATCAGAATCAAGT
GCTCTTAGAGCTTCATAATCTAAGTCATCAAACTCCCAATCAAGAAGAGCCAGCTGGAGCCTAAGTCCTTGAAGACGCCCTCTGGT
AGCAAGAGAAATGGAGGGAGGCACATGCAACCTGAGCTCAGTGTGGCTGAAGAGACCGCTAGCTGCGGCAACATGAGCCTGAGCCT
GAGCTTGAAGTTGCTGGCAAGTCGCATACATCCTAAGAGTCGTCGCCATCAAAAACACCCCAAGCACAAGCCAGAGCAGGAAATTA
GGAGGCATCTGATGCGAGTTGAGAATCATAAACAGCAGAAGAACAGTGACAAGAAAAGCGAGGGAGTTAGAGTTCACAGGTCGAGC
TCCATGAACACGCATAGCTCGTCTCTCGGGTATGAATCCTGAGAATCCGCTCTCTAAATCTCCTCTACTTCCTCTGAATACGAAAC
TCATCTTCTTCTTCTTCTTCTTTGCCTCCTGGATTTTGAGAATCTACAGAATCACGGATTTACTCTGTTATTGTATGCTGACATCG
GCGGGAGAAGACGGATTCGCCGTCGGAGCGAGAGGACTCGGGACGAGTTATCGCTCGCTCTTTAATTTTTGTCGACGGTATAGTTT
TCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002878037 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]13006e-141
NP_191112 E3 ubiquitin-protein ligase SDIR1 [Arabidopsis thaliana]12603e-136
CBI31650 unnamed protein product [Vitis vinifera]11124e-119
ADN34069 protein binding protein [Cucumis melo subsp. melo]11081e-118
XP_002283148 PREDICTED: hypothetical protein [Vitis vinifera]11025e-118

Swiss-Prot top hits (Blast detail)Scoree value
Q9M2S6 E3 ubiquitin-protein ligase SDIR112601e-137
Q3U2C5 E3 ubiquitin-protein ligase RNF1491685e-011
Q6NRX0 E3 ubiquitin-protein ligase RNF1491685e-011
Q8NC42 E3 ubiquitin-protein ligase RNF1491676e-011
Q68DV7 RING finger protein 431604e-010

TrEMBL top hits (Blast detail)Scoree value
B9HTG7 Predicted protein10853e-116
B9T008 Protein binding protein, putative10773e-115
B9HPE3 Predicted protein10746e-115
C6TKE4 Putative uncharacterized protein10738e-115
C6TGC2 Putative uncharacterized protein10622e-113

Arabidopsis top hits (Blast detail)Scoree value
AT3G55530.1 SDIR1 (SALT- AND DROUGHT-INDUCED RING FINGER1); protein binding / ubiquitin-protein ligase/ zinc ion binding12601e-138
AT5G24870.1 zinc finger (C3HC4-type RING finger) family protein1641e-011
AT5G24870.2 zinc finger (C3HC4-type RING finger) family protein1641e-011
AT1G04790.1 zinc finger (C3HC4-type RING finger) family protein1622e-011
AT1G55530.1 zinc finger (C3HC4-type RING finger) family protein1622e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
103  60%
 
62  40%

Unigene MembersMember information