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Information for unigene UN19168

FASTA Sequence
Unigene ID: UN19168Length: 945  SNP
AAAGCTTGAATGGGTGGTTACTGGTGTAAAACGAAAGAAACAATTGACGGTTTTGATAGGATACTGTGACAAGAAAATAGTCTCAA
CATTGTAATAAACGATCACTGAAACCTCTGAGGTGGTCTATTTCAAGCTTTTAACGATCCTGAACGTTTCAAGAACTAAAAACAAC
CACAAGAAAGAGCGAGAGATCACATTGAGACGAAGCGGGCTTTGTACATAATGATGTACGCCATATGCCAATCACCTCCTCCGGAG
AGCTTGGTGATGTCTTCCTCGCGTTGCAGGCTTGGGTGGCTATCATCGTACTGAATCCATTTGCCACTCTCTTGCTTGACCCATGC
AACATAATGCCCAGAGTCCGCACTCCTTCCCTTGTGGGTTAGCACAGAGACCAGGTCATAGATTCCGGTCATGTGAAGAGTTCCCT
TCTCAGATGAAGCACCTTCTTGTTGAGTAACGGTGGATGATTCTCCACTTTCATTTGATGTCGCCTCTGCATCAGTCATTTTCACA
TCGGTCTCCTTTGAGCTACTCTTTGGTTGCAGACCAAGCTTTTTACCTTCCTCATCTCTTAGTTTCTGGCGAGGAGCTTCCAGTTT
CTTTCGGAGATCCTCAGAACAAAGGTCAAAAATATCCAACTCCAGCGGATAATCCACTTTCCTGAGGATCTTTGCTTTCTGATTAG
TCTCCCTTTTCCAGAAGAATCGCACAAACTGAACGGTCAAGTAACTGGGCAAGGAATCTATAAGGGACTCCTTGAGGTAAAGCGCA
GTACGTCCAAGAGCAGGAGATGTCTTTTCAAGTTCTCCTTTCAGACCATGTTTTAATCCTTCATGCAAGTGGTTCACCTCGTGTGA
TATATGACATTTCAGAGAATATACAGATTCCGTCTCTGAGCTTTCTTCGCCACTTTCTTGACAATGCACCCTGCTCCGAAGATTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002894329 ubiquitin-specific protease 6 [Arabidopsis lyrata subsp. lyrata]11742e-126
AAG42751 ubiquitin-specific protease 6 [Arabidopsis thaliana]11652e-125
NP_564596 ubiquitin carboxyl-terminal hydrolase 6 [Arabidopsis thaliana]11652e-125
NP_001077698 ubiquitin carboxyl-terminal hydrolase 6 [Arabidopsis thaliana]11652e-125
AAG50872 tRNA-guaninine transglycosylase, putative [Arabidopsis thaliana]11454e-123

Swiss-Prot top hits (Blast detail)Scoree value
Q949Y0 Ubiquitin carboxyl-terminal hydrolase 611658e-127
Q84WC6 Ubiquitin carboxyl-terminal hydrolase 711012e-119
Q92353 Ubiquitin carboxyl-terminal hydrolase 64426e-043
P43593 Ubiquitin carboxyl-terminal hydrolase 63834e-036
Q0IIF7 Ubiquitin carboxyl-terminal hydrolase 143046e-027

TrEMBL top hits (Blast detail)Scoree value
B3H5V4 Ubiquitin carboxyl-terminal hydrolase11651e-125
B9MWQ3 Ubiquitin carboxyl-terminal hydrolase10252e-109
B9T7A3 Ubiquitin carboxyl-terminal hydrolase10234e-109
B9N1B6 Ubiquitin carboxyl-terminal hydrolase10082e-107
A9NUT3 Ubiquitin carboxyl-terminal hydrolase9061e-095

Arabidopsis top hits (Blast detail)Scoree value
AT1G51710.1 UBP6 (UBIQUITIN-SPECIFIC PROTEASE 6); calmodulin binding / ubiquitin-specific protease11666e-128
AT1G51710.2 UBP6 (UBIQUITIN-SPECIFIC PROTEASE 6); calmodulin binding / ubiquitin-specific protease11666e-128
AT3G21280.1 UBP7 (UBIQUITIN-SPECIFIC PROTEASE 7); ubiquitin thiolesterase/ ubiquitin-specific protease11021e-120
AT3G49600.1 UBP26 (UBIQUITIN-SPECIFIC PROTEASE 26); ubiquitin thiolesterase/ ubiquitin-specific protease1154e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
123  30%
 
111  10%
 
83  30%
 
62  20%
 
101  10%

Unigene MembersMember information