Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN19197

FASTA Sequence
Unigene ID: UN19197Length: 931 SSRSNP
GGGAGAAAAACCCTAACAGAATTTCAGTATTTCGAGAGTGATCGGAAAACATGGCGGTTGGTCTAAGAGAGTTCGCGCGCAGAACC
GGAAACGGCTCCGGAACACCACCGGTGCTAGACGAATCTAACGGTGAGGAACTCATGCACGTGCAGCCCTCCGTCGCCGTCGCTCT
CGGCAATCGATCCCTCGAGTCTCCAGGAACGCTCTACATCACTTCCAGGAAATTGATTTGGCTGAGTGATGTAGACATGGCGAAAG
GCTACGCCGTCGATTTCTTATCGATATCGCTACACGCAGTGTCTAGAGATCCAGAGGCTTATTCATCTCCTTGTATATATACTCAG
ATTGAAGTTGAAGAAGATGAGGATGAAGAAGATGAGGATGATGCAGAATCTACTGGAGTTTTGGACTTGTCTAAGATCAGAGAGAT
GAGGCTTGTTCCTTCTGACTCTGCCCAGTTGGATACTCTGTTTGATATGTTCTGTGAATGTGCTGAGCTCAATCCAGAACCAGTTG
AAGAAGAAGAAGAAGAAGAAAGTGAACATAACTGGGTGTTTAGTGCTGATCAGATGGTTGTTGGTGGAGGAGCGGAAGAAGACGGC
GAATGGCCAATATCTCAGAGCCCGACTAGTGTTATTGGTCTATCCGTTGGAGATGAAGGTCTTACTCAGCCTATGCTCGAGCTCCA
TATCAATGATCAGAGGTTTGATGATGCTGAAGAGATGGTTCATGAAAGTGAGACCAAAGATCACTAATCTGTCCACAAATGTATTA
CGCTAAGACAGAGTTGTTTCTTATGTTAAGACAATGGCGTCTCTGTGTTCTTCAGAGTCCATGTGCTTTGTTAAATATGTGTTTAG
ACTTGGAAGGTAGCTCATCTTGTTATCTCTCTCATTAGTCACTGGTACTCATTGACGGACCAGAACATAAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_201035 nucleotide-sensitive chloride conductance regulator family protein [Arabidopsis thaliana]9662e-102
XP_002864782 hypothetical protein ARALYDRAFT_496406 [Arabidopsis lyrata subsp. lyrata]9635e-102
NP_001119478 nucleotide-sensitive chloride conductance regulator family protein [Arabidopsis thaliana]9545e-101
CBJ19441 nucleotide-sensitive chloride conductance regulator [Citrus clementina]7602e-078
XP_002322413 predicted protein [Populus trichocarpa]7592e-078

Swiss-Prot top hits (Blast detail)Scoree value
P35521 Methylosome subunit pICln2169e-017
P54105 Methylosome subunit pICln2061e-015
Q5R719 Methylosome subunit pICln2061e-015
Q75JC9 Uncharacterized protein DDB_G02716701423e-008
P87179 Cell wall integrity and stress response component 11291e-006

TrEMBL top hits (Blast detail)Scoree value
Q9LVA7 Genomic DNA, chromosome 5, P1 clone:MMI99742e-103
B3H4U0 Uncharacterized protein At5g62290.29689e-103
D2U835 Nucleotide-sensitive chloride conductance regulator7653e-079
B9ICV4 Predicted protein7591e-078
B9I4K9 Predicted protein7582e-078

Arabidopsis top hits (Blast detail)Scoree value
AT5G62290.1 nucleotide-sensitive chloride conductance regulator (ICln) family protein9758e-106
AT5G62290.2 nucleotide-sensitive chloride conductance regulator (ICln) family protein9694e-105

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  13%
 
63  38%
 
94  50%

Unigene MembersMember information