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Information for unigene UN19197
FASTA Sequence |
Unigene ID: UN19197 | Length: 931 |
SSR | SNP | GGGAGAAAAACCCTAACAGAATTTCAGTATTTCGAGAGTGATCGGAAAACATGGCGGTTGGTCTAAGAGAGTTCGCGCGCAGAACC
GGAAACGGCTCCGGAACACCACCGGTGCTAGACGAATCTAACGGTGAGGAACTCATGCACGTGCAGCCCTCCGTCGCCGTCGCTCT
CGGCAATCGATCCCTCGAGTCTCCAGGAACGCTCTACATCACTTCCAGGAAATTGATTTGGCTGAGTGATGTAGACATGGCGAAAG
GCTACGCCGTCGATTTCTTATCGATATCGCTACACGCAGTGTCTAGAGATCCAGAGGCTTATTCATCTCCTTGTATATATACTCAG
ATTGAAGTTGAAGAAGATGAGGATGAAGAAGATGAGGATGATGCAGAATCTACTGGAGTTTTGGACTTGTCTAAGATCAGAGAGAT
GAGGCTTGTTCCTTCTGACTCTGCCCAGTTGGATACTCTGTTTGATATGTTCTGTGAATGTGCTGAGCTCAATCCAGAACCAGTTG
AAGAAGAAGAAGAAGAAGAAAGTGAACATAACTGGGTGTTTAGTGCTGATCAGATGGTTGTTGGTGGAGGAGCGGAAGAAGACGGC
GAATGGCCAATATCTCAGAGCCCGACTAGTGTTATTGGTCTATCCGTTGGAGATGAAGGTCTTACTCAGCCTATGCTCGAGCTCCA
TATCAATGATCAGAGGTTTGATGATGCTGAAGAGATGGTTCATGAAAGTGAGACCAAAGATCACTAATCTGTCCACAAATGTATTA
CGCTAAGACAGAGTTGTTTCTTATGTTAAGACAATGGCGTCTCTGTGTTCTTCAGAGTCCATGTGCTTTGTTAAATATGTGTTTAG
ACTTGGAAGGTAGCTCATCTTGTTATCTCTCTCATTAGTCACTGGTACTCATTGACGGACCAGAACATAAC
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GenBank top hits (Blast detail) | Score | e value |
NP_201035 nucleotide-sensitive chloride conductance regulator family protein [Arabidopsis thaliana] | 966 | 2e-102 |
XP_002864782 hypothetical protein ARALYDRAFT_496406 [Arabidopsis lyrata subsp. lyrata] | 963 | 5e-102 |
NP_001119478 nucleotide-sensitive chloride conductance regulator family protein [Arabidopsis thaliana] | 954 | 5e-101 |
CBJ19441 nucleotide-sensitive chloride conductance regulator [Citrus clementina] | 760 | 2e-078 |
XP_002322413 predicted protein [Populus trichocarpa] | 759 | 2e-078 |
Swiss-Prot top hits (Blast detail) | Score | e value |
P35521 Methylosome subunit pICln | 216 | 9e-017 |
P54105 Methylosome subunit pICln | 206 | 1e-015 |
Q5R719 Methylosome subunit pICln | 206 | 1e-015 |
Q75JC9 Uncharacterized protein DDB_G0271670 | 142 | 3e-008 |
P87179 Cell wall integrity and stress response component 1 | 129 | 1e-006 |
TrEMBL top hits (Blast detail) | Score | e value |
Q9LVA7 Genomic DNA, chromosome 5, P1 clone:MMI9 | 974 | 2e-103 |
B3H4U0 Uncharacterized protein At5g62290.2 | 968 | 9e-103 |
D2U835 Nucleotide-sensitive chloride conductance regulator | 765 | 3e-079 |
B9ICV4 Predicted protein | 759 | 1e-078 |
B9I4K9 Predicted protein | 758 | 2e-078 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT5G62290.1 nucleotide-sensitive chloride conductance regulator (ICln) family protein | 975 | 8e-106 |
AT5G62290.2 nucleotide-sensitive chloride conductance regulator (ICln) family protein | 969 | 4e-105 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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