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Information for unigene UN19201

FASTA Sequence
Unigene ID: UN19201Length: 1070  SNP
GGAAAACACGAAATCCTACGTTCCTCGGATCCGTTCCCACTGCTCTGATCTCTCTCTGTGATGTTGAGTCCTCAATAGGACACTGT
AAAAGCGAAAACGAAACAAGTGATTGTGCGTGACATGAACTTTCGAAGGGAGAATCGTGCATCGAGGACATCTCTCTTCGACGGGC
TTGATGGACTCGAGGAAGGTCGCTTGAGAGCTTCCTCTTCCTACTCTGCGTTGATACCACTGCTTACGGCCGGGGAGGGTTCTTCC
GAGTCATCCATCCATCCAAGGGGAGAGAAAAGAAACGCTACGATCACGAGAAGGGCAAACGATTCGTTCCTAATTGTTTCGATCCG
ACCTCAAGAAGAAGAAGGAAGAGGCATATCATCATCATTCATCATGATAGGATTGTTCAAGGTTAAGGAGAAGCAAAAAGAGGAAG
CTAAGAACAACAACACAAGAGGAGCTTCTGCCAAGAAACAATCTGCTGGTGAACTTCGTCTTCACAAAGATATAACAGAGCTGAAT
CTGCCAAAGTCTTGTTCAATATCTTTTCCTAATGGAAAGAATGACTTGATGAACTTTGAAGTCACCATCAAACCCGACGACGGCTA
TTACTTAGGTGGTAAATTCGTTTTCACGTTCCAAGTCTCTCCGGTGTATCCACATGAAGCTCCAAAAGTTAAGTGCAAGACCAAGG
TGTACCATCCGAATATCGATTTAGAAGGTAACGTTTGTCTCAACATCTTGCGTGAAGACTGGAAACCTGTTCTCAACATTAACACT
CTCATCTACGGTCTTTTCCATCTCTTCACGGAACCCAATCACGAGGATCCTCTCAACCATGACGCAGCAGCGGTTTTAAGGGATAA
CCCCAAGCAGTTTGAGTCTAATGTCAAGAGGGCTATGAGTGGTGGCTATGTTGGCCAAACCTCATTCCCTCGCTGCATCTAAGTTA
TAATAAGCTATGCTTCTGTTTCACTTCACTTTTCTTCTTCTCTAGAGACTTTTTGTGTTTGCTCTCTTGTACATTTTGGCTTTTAT
GACATCGCTTTTATTATAATATATCATCAAATACCAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002886185 hypothetical protein ARALYDRAFT_343491 [Arabidopsis lyrata subsp. lyrata]8865e-093
NP_001154289 NEDD8-conjugating enzyme Ubc12 [Arabidopsis thaliana]8767e-092
NP_565440 ubiquitin-conjugating enzyme E2 M [Arabidopsis thaliana]8678e-091
BAJ33605 unnamed protein product [Thellungiella halophila]8632e-090
XP_002525098 ubiquitin-conjugating enzyme m, putative [Ricinus communis]8552e-089

Swiss-Prot top hits (Blast detail)Scoree value
Q9SDY5 NEDD8-conjugating enzyme Ubc128763e-093
Q9ZU75 Probable NEDD8-conjugating enzyme Ubc12-like8673e-092
Q6DCZ9 NEDD8-conjugating enzyme Ubc126156e-063
Q6P8D9 NEDD8-conjugating enzyme Ubc126102e-062
A3KN22 NEDD8-conjugating enzyme Ubc126084e-062

TrEMBL top hits (Blast detail)Scoree value
B9SGH9 Ubiquitin carrier protein8551e-089
B6E0M7 Ubiquitin carrier protein8471e-088
A5AHT5 Ubiquitin carrier protein8443e-088
C6SV99 Ubiquitin carrier protein8362e-087
Q2I309 Ubiquitin carrier protein8353e-087

Arabidopsis top hits (Blast detail)Scoree value
AT4G36800.1 RCE1 (RUB1 CONJUGATING ENZYME 1); NEDD8 ligase/ small conjugating protein ligase8772e-094
AT4G36800.2 RCE1 (RUB1 CONJUGATING ENZYME 1); NEDD8 ligase/ small conjugating protein ligase8772e-094
AT2G18600.1 RUB1-conjugating enzyme, putative8682e-093
AT5G56150.1 UBC30 (ubiquitin-conjugating enzyme 30); ubiquitin-protein ligase2491e-021
AT5G56150.2 UBC30 (ubiquitin-conjugating enzyme 30); ubiquitin-protein ligase2491e-021

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
65  38%
 
96  46%
 
101  8%
 
81  8%

Unigene MembersMember information